Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 AL035423.1-201ENST00000420331 213 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 BEND7P1-201ENST00000422058 457 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 RPL7L1P10-201ENST00000427790 463 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 RPL35AP22-201ENST00000436855 335 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AL136380.1-201ENST00000447970 162 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC017099.1-201ENST00000448261 1028 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 BX322784.1-201ENST00000455793 1077 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC092902.1-201ENST00000486999 259 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 RPS29P20-201ENST00000489592 171 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC006499.2-201ENST00000513470 337 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC022861.1-201ENST00000522981 663 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC125611.1-201ENST00000549563 229 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC104072.1-201ENST00000568817 668 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AP001429.1-201ENST00000602568 530 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AL109918.3-201ENST00000603072 338 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AL035411.2-201ENST00000604022 421 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 RPL21P136-201ENST00000605378 396 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC013562.2-201ENST00000611632 603 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC004852.3-201ENST00000614131 326 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC090132.2-201ENST00000615881 347 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC005296.1-201ENST00000616145 209 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 MIR622-201ENST00000638396 96 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 AC008555.8-201ENST00000623602 2168 ntBASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.35□□□□□ -2.19
CYSTM1Q9H1C7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AP005901.5-201ENST00000545779 1796 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 SNORA3A-201ENST00000364113 130 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AL031679.1-201ENST00000400616 525 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 RPL17P12-201ENST00000413391 526 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 HMGB1P11-201ENST00000413899 637 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AL449283.1-202ENST00000418249 604 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 RPL31P63-201ENST00000422565 375 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AC002381.1-201ENST00000447049 280 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 WASF1P1-201ENST00000447560 1131 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AC073387.1-201ENST00000453261 709 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 RBMY2UP-201ENST00000453474 324 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 MTCO3P11-201ENST00000455103 774 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 ANKRD26P4-201ENST00000455755 950 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AC105252.1-201ENST00000503089 286 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 WBP1LP4-201ENST00000505043 344 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 SUMO2P6-201ENST00000505273 288 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AC026427.2-201ENST00000506228 536 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AC074250.1-201ENST00000511117 192 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 SNORA31.22-201ENST00000517204 135 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 RNU6-840P-201ENST00000517275 65 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 CCNG2P1-201ENST00000549521 1000 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 MIR5002-201ENST00000584713 97 ntBASIC1.34□□□□□ -2.19
CYSTM1Q9H1C7 BBIP1P1-201ENST00000602999 279 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms