Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 RNU6-437P-201ENST00000459408 95 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 RPL7P38-201ENST00000488396 739 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 RNU6-991P-201ENST00000516168 107 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 RN7SKP98-201ENST00000517070 156 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC092747.2-201ENST00000545069 983 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 STMN1P1-201ENST00000617809 440 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC092650.2-201ENST00000619984 902 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.72-201ENST00000362894 103 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.169-201ENST00000363745 96 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU6-382P-201ENST00000365181 106 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU6-1144P-201ENST00000384247 104 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU6-601P-201ENST00000384540 107 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AL627390.1-201ENST00000396055 340 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 DSTNP4-201ENST00000399472 474 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC009237.2-201ENST00000421358 284 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 EIF4EP4-201ENST00000424916 578 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 COX6B1P7-201ENST00000430845 235 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RPL27AP5-201ENST00000469428 449 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 UBL5P3-201ENST00000475112 231 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC010409.1-201ENST00000487382 476 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 PCBP2P3-201ENST00000509726 843 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 SNORA70.17-201ENST00000516449 133 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AP003497.1-201ENST00000528472 562 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 DEFB131E-201ENST00000532329 154 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AL139124.1-201ENST00000609123 421 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC098657.3-201ENST00000620434 263 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MTND1P7-201ENST00000632801 297 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU6-106P-201ENST00000384405 107 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU6-606P-201ENST00000384721 111 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 ERHP2-201ENST00000402323 299 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MIR548F1-201ENST00000408667 84 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AL358472.1-201ENST00000431295 329 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AL162725.1-201ENST00000435405 301 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 MTCO3P10-201ENST00000455912 772 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU7-171P-201ENST00000459581 62 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC010468.1-201ENST00000461022 817 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RN7SL809P-201ENST00000482040 297 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC012158.1-204ENST00000483430 465 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU6-523P-201ENST00000516304 54 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC005832.3-201ENST00000537929 631 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 U73023.1-201ENST00000603134 700 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 AL590808.1-201ENST00000618696 141 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU6-633P-201ENST00000362612 103 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.138-201ENST00000363462 102 ntBASIC1.38□□□□□ -2.19
HMCN1Q96RW7 RNU6-1160P-201ENST00000384546 104 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms