Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC008837.1-201ENST00000511513 412 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 AC078814.3-201ENST00000553036 491 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 AC008507.2-201ENST00000588402 1176 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 BNIP3P11-201ENST00000603878 563 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 BNIP3P19-201ENST00000605397 577 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 AP001521.1-201ENST00000609150 300 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 RNU6-707P-201ENST00000364647 95 ntBASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 RNU6-878P-201ENST00000384578 110 ntBASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 MIR183-201ENST00000384958 110 ntBASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 RN7SKP158-201ENST00000410453 326 ntBASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 AL591503.2-201ENST00000442314 1005 ntBASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 VN1R10P-201ENST00000447106 875 ntBASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 RFC5P1-201ENST00000454419 874 ntBASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 FAM133DP-201ENST00000464802 691 ntBASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 KLF3P2-201ENST00000465138 268 ntBASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 RN7SKP157-201ENST00000516174 282 ntBASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 AC087897.1-201ENST00000550134 156 ntBASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 AC034105.4-201ENST00000568304 277 ntBASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 AL109618.2-201ENST00000605527 211 ntBASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 AP002802.2-201ENST00000605877 235 ntBASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
PKNOX2Q96KN3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 AL079342.2-201ENST00000403367 482 ntBASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 BEND7P1-201ENST00000422058 457 ntBASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 DPRXP1-201ENST00000426312 460 ntBASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 PTGES3P1-201ENST00000439531 483 ntBASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 CYCSP32-201ENST00000440548 321 ntBASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 AC112653.1-201ENST00000443851 386 ntBASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 AC092757.1-201ENST00000467293 467 ntBASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 RPL23AP41-201ENST00000484754 458 ntBASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 AC108043.1-201ENST00000512696 574 ntBASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 AC112198.4-201ENST00000515450 351 ntBASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 CYCSP39-201ENST00000565821 309 ntBASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 AC010975.3-201ENST00000618727 978 ntBASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.75□□□□□ -1.97
PKNOX2Q96KN3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 HSPE1P11-201ENST00000339579 310 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 MIR506-201ENST00000384998 124 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 SNORD65.1-201ENST00000390889 71 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 SNORA40.4-201ENST00000390971 128 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AL024507.1-201ENST00000412741 274 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 PSMA6P3-201ENST00000428242 164 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 SEPT7P5-201ENST00000434048 306 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 RPS20P5-201ENST00000434808 360 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AC093155.1-201ENST00000440164 826 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 MTCYBP42-201ENST00000444653 1130 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 USP9YP34-201ENST00000453983 808 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 PMCHL2-203ENST00000457791 237 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AC016550.1-201ENST00000505348 785 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AC010460.2-201ENST00000509054 677 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 SNORA74D-201ENST00000516404 141 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 MIR892C-201ENST00000516410 77 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 RNU6-1261P-201ENST00000517194 104 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 RN7SKP57-201ENST00000517248 293 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AP001189.2-201ENST00000527320 189 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 ANP32BP3-201ENST00000559213 706 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 H3F3AP1-201ENST00000559984 334 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AC126365.2-201ENST00000580630 379 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AL035411.2-201ENST00000604022 421 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms