Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6□□□□□ -1.45
LRCH3Q96II8 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
LRCH3Q96II8 AL731532.1-201ENST00000623972 4236 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LRCH3Q96II8 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LRCH3Q96II8 AC015799.1-201ENST00000622996 3122 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6□□□□□ -1.45
LRCH3Q96II8 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LRCH3Q96II8 AC079741.1-201ENST00000321498 212 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 Y_RNA.7-201ENST00000362352 102 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 Y_RNA.75-201ENST00000362927 97 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 Y_RNA.238-201ENST00000364441 102 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6□□□□□ -1.45
LRCH3Q96II8 RPL23AP17-201ENST00000401064 499 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 RNU2-2P-201ENST00000410396 191 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 RPL31P2-201ENST00000413849 377 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 AC015977.1-201ENST00000418887 292 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 OR2AM1P-201ENST00000422137 422 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6□□□□□ -1.45
LRCH3Q96II8 AL035690.1-201ENST00000490892 383 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 HMGB3P16-201ENST00000508037 287 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC6□□□□□ -1.45
LRCH3Q96II8 MIR5096-201ENST00000583713 70 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6□□□□□ -1.45
LRCH3Q96II8 AC008814.1-201ENST00000603797 406 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 RNU2-4P-201ENST00000606190 192 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 U2.15-201ENST00000611544 191 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 U2.16-201ENST00000613119 191 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 U2.12-201ENST00000613778 191 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 U2.9-201ENST00000615427 191 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 U2.11-201ENST00000616345 191 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 U2.2-201ENST00000616535 191 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 AC109583.2-201ENST00000617367 129 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 U2.3-201ENST00000617785 191 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 U2.19-201ENST00000618602 191 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 RNU2-1-201ENST00000618664 191 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 U2.6-201ENST00000619225 191 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 U2.5-201ENST00000619465 191 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 U2.10-201ENST00000620268 191 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC6□□□□□ -1.45
LRCH3Q96II8 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6□□□□□ -1.45
LRCH3Q96II8 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
LRCH3Q96II8 AL359955.1-201ENST00000455242 3275 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
LRCH3Q96II8 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6□□□□□ -1.45
LRCH3Q96II8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
LRCH3Q96II8 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
LRCH3Q96II8 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LRCH3Q96II8 AC109446.4-201ENST00000623235 2755 ntBASIC6□□□□□ -1.45
LRCH3Q96II8 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
LRCH3Q96II8 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LRCH3Q96II8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
LRCH3Q96II8 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
LRCH3Q96II8 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LRCH3Q96II8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.99□□□□□ -1.45
LRCH3Q96II8 RNU6-989P-201ENST00000362756 107 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 Y_RNA.123-201ENST00000363338 102 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 RPS4XP3-201ENST00000398541 413 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 RN7SKP151-201ENST00000410230 316 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 RNU2-50P-201ENST00000410494 143 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.99□□□□□ -1.45
LRCH3Q96II8 AC092447.6-201ENST00000414578 210 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 RPL30P13-201ENST00000418873 348 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 AC016700.2-201ENST00000446011 156 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.99□□□□□ -1.45
LRCH3Q96II8 SUMO2P18-201ENST00000518873 252 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 HMGB1P40-201ENST00000525121 540 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 TRAV37-201ENST00000553906 342 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 AC009127.3-201ENST00000570531 403 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 SRGNP1-201ENST00000603392 451 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 AL162431.4-201ENST00000604674 411 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 RPL23AP88-201ENST00000605759 454 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LRCH3Q96II8 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LRCH3Q96II8 SAGE4P-201ENST00000442271 3381 ntBASIC5.99□□□□□ -1.45
LRCH3Q96II8 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LRCH3Q96II8 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
LRCH3Q96II8 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LRCH3Q96II8 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRCH3Q96II8 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRCH3Q96II8 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRCH3Q96II8 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRCH3Q96II8 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.98□□□□□ -1.45
LRCH3Q96II8 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRCH3Q96II8 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LRCH3Q96II8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRCH3Q96II8 RNU6-339P-201ENST00000384310 107 ntBASIC5.98□□□□□ -1.45
LRCH3Q96II8 Y_RNA.570-201ENST00000384750 101 ntBASIC5.98□□□□□ -1.45
LRCH3Q96II8 AL133388.1-201ENST00000404509 287 ntBASIC5.98□□□□□ -1.45
LRCH3Q96II8 RNU2-22P-201ENST00000411266 212 ntBASIC5.98□□□□□ -1.45
LRCH3Q96II8 POLR2KP2-201ENST00000438155 177 ntBASIC5.98□□□□□ -1.45
LRCH3Q96II8 GAPDHP25-201ENST00000447061 1001 ntBASIC5.98□□□□□ -1.45
LRCH3Q96II8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.98□□□□□ -1.45
LRCH3Q96II8 AC112187.1-201ENST00000455837 479 ntBASIC5.98□□□□□ -1.45
LRCH3Q96II8 AC009127.1-201ENST00000467090 155 ntBASIC5.98□□□□□ -1.45
LRCH3Q96II8 RPS15AP34-201ENST00000487776 387 ntBASIC5.98□□□□□ -1.45
LRCH3Q96II8 RN7SKP272-201ENST00000516988 232 ntBASIC5.98□□□□□ -1.45
LRCH3Q96II8 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.98□□□□□ -1.45
LRCH3Q96II8 AC055872.1-201ENST00000570978 278 ntBASIC5.98□□□□□ -1.45
LRCH3Q96II8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms