Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC097713.2-201ENST00000430199 356 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AL159987.2-201ENST00000432754 307 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC010153.1-201ENST00000432862 727 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC129850.1-201ENST00000436203 508 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC008155.2-201ENST00000464337 397 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC109486.1-201ENST00000486833 374 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 OR2A20P-203ENST00000498397 1268 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 DSTNP2-201ENST00000504533 515 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 MTND5P13-201ENST00000513046 1079 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC087276.1-201ENST00000529659 480 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 NCAPGP2-201ENST00000557911 754 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 CKS1BP3-201ENST00000600888 237 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC013553.2-201ENST00000604244 589 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC107294.3-201ENST00000609211 526 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC011939.3-201ENST00000613686 466 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 MIR7844-201ENST00000616161 122 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AL356596.1-201ENST00000624230 379 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC091903.1-201ENST00000624322 454 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AL049641.1-201ENST00000441055 1948 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC099654.7-201ENST00000635788 2127 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 AC022336.2-201ENST00000568966 2538 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
PDLIM5Q96HC4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PDLIM5Q96HC4 AC007785.2-201ENST00000598627 1916 ntBASIC3.15□□□□□ -1.9
PDLIM5Q96HC4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PDLIM5Q96HC4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PDLIM5Q96HC4 RNU4-21P-201ENST00000362802 126 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 SNORA23-201ENST00000365128 182 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 RNU6-1035P-201ENST00000384477 107 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 SNORA26.8-201ENST00000391306 124 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 BTF3L4P1-201ENST00000413813 468 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 OR2AS1P-201ENST00000427827 319 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 RPL23AP69-201ENST00000431134 458 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 MTCO2P16-201ENST00000436962 677 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 ARPC3P1-201ENST00000437218 533 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 AL117351.1-201ENST00000438864 766 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 KATNBL1P6-201ENST00000453433 915 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 MTCO2P18-201ENST00000457151 658 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 snoU13.28-201ENST00000459235 104 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 AC091435.1-201ENST00000505442 584 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 AC110794.1-201ENST00000505816 425 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 MTCYBP43-201ENST00000513621 740 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 OR4H12P-201ENST00000556269 907 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 RPL23AP78-201ENST00000599928 470 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 AL390237.1-201ENST00000404226 1415 ntBASIC3.15□□□□□ -1.91
PDLIM5Q96HC4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AL021368.2-201ENST00000606125 5352 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AL672167.1-206ENST00000356293 943 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 Y_RNA.201-201ENST00000364052 96 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 RNU6-853P-201ENST00000364306 107 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 RNU6-741P-201ENST00000383889 107 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 RNU6-723P-201ENST00000383973 107 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 Y_RNA.436-201ENST00000384097 102 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 Y_RNA.548-201ENST00000384656 105 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 MIR183-201ENST00000384958 110 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 TXNP7-201ENST00000406296 293 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 FTH1P1-201ENST00000437933 532 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AL512286.1-201ENST00000439244 400 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AL360221.1-201ENST00000445989 335 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 CYCSP35-201ENST00000451978 304 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 ZNF114P1-201ENST00000453500 292 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AC034159.1-201ENST00000513885 583 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 MTND5P4-201ENST00000514978 288 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms