Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 XKRY-201ENST00000510392 1100 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 RNA5SP356-201ENST00000515972 94 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AC124947.2-202ENST00000552735 133 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 PRELID2P1-201ENST00000552837 301 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AC135628.1-201ENST00000568867 534 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 OR4K7P-201ENST00000580232 945 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 BNIP3P24-201ENST00000593398 557 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AL163152.1-201ENST00000642001 374 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AC005832.2-201ENST00000538921 1430 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AC010329.5-201ENST00000623497 2174 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 SNORA80A-201ENST00000363922 136 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 SNORA3A-201ENST00000364113 130 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 RNU6-354P-201ENST00000383862 107 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 RNU6-610P-201ENST00000384264 107 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 MIR506-201ENST00000384998 124 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 RPL22P22-201ENST00000395439 379 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AL355497.1-201ENST00000406262 551 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 IPO7P1-201ENST00000442031 636 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 COX6CP18-201ENST00000448769 222 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AC138853.1-201ENST00000503549 823 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AC119751.5-201ENST00000514077 770 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 SCARNA15.2-201ENST00000516409 127 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AL391261.3-201ENST00000557194 520 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AC026741.1-201ENST00000605892 482 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AP000238.1-201ENST00000608759 426 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AC092954.1-201ENST00000609121 445 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AP001521.1-201ENST00000609150 300 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AC080128.1-201ENST00000474389 1917 ntBASIC2.29□□□□□ -2.04
CLHC1Q8NHS4 AC097714.1-201ENST00000511272 1647 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 RNU6-76P-201ENST00000384060 104 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 Y_RNA.500-201ENST00000384466 111 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 AL592310.1-201ENST00000414330 671 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 MTCYBP15-201ENST00000433123 1127 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 OR10R1P-201ENST00000441524 1141 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 AL513328.1-201ENST00000446460 224 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 LINC00888-204ENST00000487386 421 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 AL049874.1-201ENST00000489560 388 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 COL6A4P2-205ENST00000509855 506 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 RNU6-1256P-201ENST00000516539 103 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 AC103783.1-201ENST00000520506 373 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 OR8K2P-201ENST00000524645 927 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 UBTFL10-201ENST00000528532 562 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 AC021749.1-201ENST00000604322 607 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 AC080013.4-201ENST00000607624 649 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 U4.3-201ENST00000621047 82 ntBASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLHC1Q8NHS4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
CLHC1Q8NHS4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 RNU6-207P-201ENST00000384137 107 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 MIR514A1-201ENST00000385133 98 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 SNORD23.1-201ENST00000408212 104 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 HMGB1P49-201ENST00000418882 569 ntBASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.27□□□□□ -2.05
CLHC1Q8NHS4 MOB1AP2-201ENST00000446060 614 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms