Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CBX3P2-202ENST00000583365 535 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 RPS15AP11-201ENST00000594193 385 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 PCNAP1-202ENST00000595299 752 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
VPS8Q8N3P4 CDC27P3-201ENST00000635418 1910 ntBASIC2.03□□□□□ -2.08
VPS8Q8N3P4 MIR758-201ENST00000390227 88 ntBASIC2.03□□□□□ -2.08
VPS8Q8N3P4 SSR1P1-201ENST00000407630 814 ntBASIC2.03□□□□□ -2.08
VPS8Q8N3P4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.03□□□□□ -2.08
VPS8Q8N3P4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS8Q8N3P4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS8Q8N3P4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.03□□□□□ -2.08
VPS8Q8N3P4 AC010285.1-201ENST00000470580 392 ntBASIC2.03□□□□□ -2.08
VPS8Q8N3P4 AC093801.2-201ENST00000503966 1050 ntBASIC2.03□□□□□ -2.08
VPS8Q8N3P4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS8Q8N3P4 AC084364.2-201ENST00000546924 395 ntBASIC2.03□□□□□ -2.08
VPS8Q8N3P4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS8Q8N3P4 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS8Q8N3P4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.03□□□□□ -2.08
VPS8Q8N3P4 MIR7111-201ENST00000619751 72 ntBASIC2.03□□□□□ -2.08
VPS8Q8N3P4 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.03□□□□□ -2.08
VPS8Q8N3P4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.03□□□□□ -2.08
VPS8Q8N3P4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.03□□□□□ -2.09
VPS8Q8N3P4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.03□□□□□ -2.09
VPS8Q8N3P4 UBE2D3P2-201ENST00000424409 445 ntBASIC2.02□□□□□ -2.09
VPS8Q8N3P4 IPO7P1-201ENST00000442031 636 ntBASIC2.02□□□□□ -2.09
VPS8Q8N3P4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS8Q8N3P4 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS8Q8N3P4 RNA5SP310-201ENST00000459084 116 ntBASIC2.02□□□□□ -2.09
VPS8Q8N3P4 RPL36AP21-201ENST00000490372 323 ntBASIC2.02□□□□□ -2.09
VPS8Q8N3P4 HMGB1P22-201ENST00000505315 124 ntBASIC2.02□□□□□ -2.09
VPS8Q8N3P4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
VPS8Q8N3P4 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS8Q8N3P4 AC055764.2-201ENST00000610089 670 ntBASIC2.02□□□□□ -2.09
VPS8Q8N3P4 MIR6864-201ENST00000617935 70 ntBASIC2.02□□□□□ -2.09
VPS8Q8N3P4 AC010809.3-201ENST00000621310 641 ntBASIC2.02□□□□□ -2.09
VPS8Q8N3P4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS8Q8N3P4 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.02□□□□□ -2.09
VPS8Q8N3P4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.01□□□□□ -2.09
VPS8Q8N3P4 RNU6-317P-201ENST00000384031 107 ntBASIC2.01□□□□□ -2.09
VPS8Q8N3P4 RNA5SP252-201ENST00000391131 119 ntBASIC2.01□□□□□ -2.09
VPS8Q8N3P4 AL355497.1-201ENST00000406262 551 ntBASIC2.01□□□□□ -2.09
VPS8Q8N3P4 AL512504.1-201ENST00000415494 778 ntBASIC2.01□□□□□ -2.09
VPS8Q8N3P4 UBE2V1P6-201ENST00000430840 422 ntBASIC2.01□□□□□ -2.09
VPS8Q8N3P4 AC015908.1-201ENST00000478739 476 ntBASIC2.01□□□□□ -2.09
VPS8Q8N3P4 AL135752.1-201ENST00000479477 471 ntBASIC2.01□□□□□ -2.09
VPS8Q8N3P4 RPS27P21-201ENST00000486977 252 ntBASIC2.01□□□□□ -2.09
VPS8Q8N3P4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS8Q8N3P4 SETP7-201ENST00000552169 453 ntBASIC2.01□□□□□ -2.09
VPS8Q8N3P4 MIR4658-201ENST00000584344 65 ntBASIC2.01□□□□□ -2.09
VPS8Q8N3P4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
VPS8Q8N3P4 AC115085.1-201ENST00000588924 229 ntBASIC2.01□□□□□ -2.09
VPS8Q8N3P4 AL138880.2-201ENST00000616214 239 ntBASIC2.01□□□□□ -2.09
VPS8Q8N3P4 SNORA25.9-201ENST00000365087 128 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 AL035405.1-201ENST00000400795 710 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 MIR1250-201ENST00000408098 113 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 MTCYBP24-201ENST00000420387 1106 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 MTND5P25-201ENST00000430499 799 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 Z85994.2-201ENST00000434327 452 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 MTND2P8-201ENST00000450555 1025 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2□□□□□ -2.09
VPS8Q8N3P4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2□□□□□ -2.09
VPS8Q8N3P4 TOMM22P6-201ENST00000465035 409 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 SYPL1P1-201ENST00000473622 768 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2□□□□□ -2.09
VPS8Q8N3P4 NPM1P52-201ENST00000518264 846 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 HMGB1P46-201ENST00000520062 610 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 AC009127.3-201ENST00000570531 403 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2□□□□□ -2.09
VPS8Q8N3P4 AC245884.12-201ENST00000615364 59 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 AL157834.3-201ENST00000615543 103 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2□□□□□ -2.09
VPS8Q8N3P4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2□□□□□ -2.09
VPS8Q8N3P4 RNU6-666P-201ENST00000363499 107 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 RNU6-1072P-201ENST00000384703 107 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 RNU6-443P-201ENST00000384780 107 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 RN7SKP51-201ENST00000410781 304 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 RPS20P15-201ENST00000412792 311 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2□□□□□ -2.09
VPS8Q8N3P4 RPL23AP16-201ENST00000441715 421 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2□□□□□ -2.09
VPS8Q8N3P4 snoU13.4-201ENST00000458916 104 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2□□□□□ -2.09
VPS8Q8N3P4 NDUFS5P6-201ENST00000529136 295 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2□□□□□ -2.09
VPS8Q8N3P4 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2□□□□□ -2.09
VPS8Q8N3P4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2□□□□□ -2.09
VPS8Q8N3P4 AL138976.2-201ENST00000563989 694 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 UBE2L4-201ENST00000587688 464 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2□□□□□ -2.09
VPS8Q8N3P4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.99□□□□□ -2.09
VPS8Q8N3P4 MTND5P35-201ENST00000557537 1720 ntBASIC1.99□□□□□ -2.09
VPS8Q8N3P4 Y_RNA.796-201ENST00000364268 102 ntBASIC1.99□□□□□ -2.09
VPS8Q8N3P4 Y_RNA.799-201ENST00000364992 102 ntBASIC1.99□□□□□ -2.09
VPS8Q8N3P4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS8Q8N3P4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS8Q8N3P4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.99□□□□□ -2.09
VPS8Q8N3P4 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS8Q8N3P4 OR5BM1P-201ENST00000512021 366 ntBASIC1.99□□□□□ -2.09
VPS8Q8N3P4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms