Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC099654.7-201ENST00000635788 2127 ntBASIC2.06□□□□□ -2.08
CD28P10747 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.06□□□□□ -2.08
CD28P10747 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CD28P10747 AC008669.1-201ENST00000565823 2178 ntBASIC2.06□□□□□ -2.08
CD28P10747 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CD28P10747 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CD28P10747 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.06□□□□□ -2.08
CD28P10747 SNORD62.1-201ENST00000362541 86 ntBASIC2.06□□□□□ -2.08
CD28P10747 RNU6-270P-201ENST00000364131 105 ntBASIC2.06□□□□□ -2.08
CD28P10747 MIR122-201ENST00000385044 85 ntBASIC2.06□□□□□ -2.08
CD28P10747 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CD28P10747 RPL19P1-201ENST00000411635 428 ntBASIC2.06□□□□□ -2.08
CD28P10747 RAP1BP1-201ENST00000412709 553 ntBASIC2.06□□□□□ -2.08
CD28P10747 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.06□□□□□ -2.08
CD28P10747 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.06□□□□□ -2.08
CD28P10747 AL953862.1-201ENST00000423016 168 ntBASIC2.06□□□□□ -2.08
CD28P10747 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.06□□□□□ -2.08
CD28P10747 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.06□□□□□ -2.08
CD28P10747 MTND5P14-201ENST00000441481 1267 ntBASIC2.06□□□□□ -2.08
CD28P10747 AC009237.8-201ENST00000445492 379 ntBASIC2.06□□□□□ -2.08
CD28P10747 UBBP3-201ENST00000445497 241 ntBASIC2.06□□□□□ -2.08
CD28P10747 Z96811.1-201ENST00000445880 108 ntBASIC2.06□□□□□ -2.08
CD28P10747 MTND1P9-201ENST00000453775 944 ntBASIC2.06□□□□□ -2.08
CD28P10747 RPS3P1-201ENST00000456781 192 ntBASIC2.06□□□□□ -2.08
CD28P10747 AL031183.1-201ENST00000457667 207 ntBASIC2.06□□□□□ -2.08
CD28P10747 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.06□□□□□ -2.08
CD28P10747 RNU6-420P-201ENST00000458780 107 ntBASIC2.06□□□□□ -2.08
CD28P10747 snoU13.8-201ENST00000458890 104 ntBASIC2.06□□□□□ -2.08
CD28P10747 RPS29P12-201ENST00000460178 152 ntBASIC2.06□□□□□ -2.08
CD28P10747 AL135752.1-201ENST00000479477 471 ntBASIC2.06□□□□□ -2.08
CD28P10747 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CD28P10747 AC021146.8-201ENST00000507455 733 ntBASIC2.06□□□□□ -2.08
CD28P10747 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.06□□□□□ -2.08
CD28P10747 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.06□□□□□ -2.08
CD28P10747 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CD28P10747 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CD28P10747 ELOCP31-201ENST00000540463 467 ntBASIC2.06□□□□□ -2.08
CD28P10747 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.06□□□□□ -2.08
CD28P10747 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.06□□□□□ -2.08
CD28P10747 AC027176.1-201ENST00000560204 514 ntBASIC2.06□□□□□ -2.08
CD28P10747 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CD28P10747 AL359198.2-201ENST00000611836 194 ntBASIC2.06□□□□□ -2.08
CD28P10747 AC109809.1-201ENST00000619665 545 ntBASIC2.06□□□□□ -2.08
CD28P10747 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.06□□□□□ -2.08
CD28P10747 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CD28P10747 ASNSP3-201ENST00000451989 1306 ntBASIC2.06□□□□□ -2.08
CD28P10747 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CD28P10747 AC005832.2-201ENST00000538921 1430 ntBASIC2.06□□□□□ -2.08
CD28P10747 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CD28P10747 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CD28P10747 RNU5E-8P-201ENST00000363502 116 ntBASIC2.05□□□□□ -2.08
CD28P10747 Y_RNA.311-201ENST00000365068 96 ntBASIC2.05□□□□□ -2.08
CD28P10747 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CD28P10747 XGY1-201ENST00000381172 446 ntBASIC2.05□□□□□ -2.08
CD28P10747 MIR514A1-201ENST00000385133 98 ntBASIC2.05□□□□□ -2.08
CD28P10747 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CD28P10747 AL512633.1-201ENST00000399931 655 ntBASIC2.05□□□□□ -2.08
CD28P10747 RNA5SP492-201ENST00000411330 114 ntBASIC2.05□□□□□ -2.08
CD28P10747 RPS3AP37-201ENST00000419176 745 ntBASIC2.05□□□□□ -2.08
CD28P10747 AL365496.1-201ENST00000426885 215 ntBASIC2.05□□□□□ -2.08
CD28P10747 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.05□□□□□ -2.08
CD28P10747 AL356867.1-201ENST00000429623 299 ntBASIC2.05□□□□□ -2.08
CD28P10747 RPS29P6-201ENST00000438196 145 ntBASIC2.05□□□□□ -2.08
CD28P10747 OR10R1P-201ENST00000441524 1141 ntBASIC2.05□□□□□ -2.08
CD28P10747 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.05□□□□□ -2.08
CD28P10747 AC002381.1-201ENST00000447049 280 ntBASIC2.05□□□□□ -2.08
CD28P10747 SNRPGP6-201ENST00000451124 220 ntBASIC2.05□□□□□ -2.08
CD28P10747 USP9YP10-201ENST00000454868 628 ntBASIC2.05□□□□□ -2.08
CD28P10747 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.05□□□□□ -2.08
CD28P10747 AL109741.2-201ENST00000455561 343 ntBASIC2.05□□□□□ -2.08
CD28P10747 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.05□□□□□ -2.08
CD28P10747 SRIP1-201ENST00000489235 288 ntBASIC2.05□□□□□ -2.08
CD28P10747 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.05□□□□□ -2.08
CD28P10747 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.05□□□□□ -2.08
CD28P10747 SNORA9.3-201ENST00000516383 129 ntBASIC2.05□□□□□ -2.08
CD28P10747 RNU6-1282P-201ENST00000516735 96 ntBASIC2.05□□□□□ -2.08
CD28P10747 MTND2P7-201ENST00000521337 640 ntBASIC2.05□□□□□ -2.08
CD28P10747 UBTFL10-201ENST00000528532 562 ntBASIC2.05□□□□□ -2.08
CD28P10747 OR6C7P-201ENST00000547875 934 ntBASIC2.05□□□□□ -2.08
CD28P10747 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.05□□□□□ -2.08
CD28P10747 NBEAP1-201ENST00000554452 979 ntBASIC2.05□□□□□ -2.08
CD28P10747 AL512347.1-201ENST00000566420 503 ntBASIC2.05□□□□□ -2.08
CD28P10747 MIR4635-201ENST00000583759 79 ntBASIC2.05□□□□□ -2.08
CD28P10747 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.05□□□□□ -2.08
CD28P10747 AL158211.4-201ENST00000606988 584 ntBASIC2.05□□□□□ -2.08
CD28P10747 AC004067.1-201ENST00000608733 700 ntBASIC2.05□□□□□ -2.08
CD28P10747 DUXAP10-204ENST00000612052 616 ntBASIC2.05□□□□□ -2.08
CD28P10747 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.05□□□□□ -2.08
CD28P10747 MTND4P9-201ENST00000507819 1346 ntBASIC2.05□□□□□ -2.08
CD28P10747 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CD28P10747 AC092447.10-201ENST00000620607 1652 ntBASIC2.05□□□□□ -2.08
CD28P10747 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.05□□□□□ -2.08
CD28P10747 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CD28P10747 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CD28P10747 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CD28P10747 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CD28P10747 AL161781.1-201ENST00000354277 403 ntBASIC2.04□□□□□ -2.08
CD28P10747 RNU5A-1-201ENST00000362698 116 ntBASIC2.04□□□□□ -2.08
CD28P10747 RSL24D1P4-201ENST00000400938 484 ntBASIC2.04□□□□□ -2.08
CD28P10747 RNU4-22P-201ENST00000411058 166 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms