Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LRRC53A6NM62 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.55□□□□□ -1.84
LRRC53A6NM62 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
LRRC53A6NM62 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
LRRC53A6NM62 AL672296.1-201ENST00000427780 2158 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
LRRC53A6NM62 DEFB108F-201ENST00000344638 222 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 RNU6-1119P-201ENST00000384349 108 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 MRPL42P2-201ENST00000403169 426 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 RPL21P24-201ENST00000413752 448 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 RPS15AP12-201ENST00000419498 388 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 HSPD1P21-201ENST00000436541 245 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 MTCO3P45-201ENST00000443036 613 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 AC008481.1-201ENST00000463278 396 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 AC010587.1-201ENST00000505809 469 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 AC105914.1-201ENST00000511798 226 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 APOOP4-201ENST00000513530 597 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 SNORA70.16-201ENST00000516390 95 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 SNORA18.6-201ENST00000516792 115 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LRRC53A6NM62 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 OR4H12P-201ENST00000556269 907 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 AC005951.2-201ENST00000576282 495 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 MIR3913-1-201ENST00000577744 102 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 ZNF415P1-201ENST00000582279 1166 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 MIR4293-201ENST00000584305 78 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 MIR3922-201ENST00000585192 84 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 AF038458.1-201ENST00000588406 262 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 AP000860.1-201ENST00000605250 559 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 uc_338.12-201ENST00000616344 181 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 AC006338.1-201ENST00000618453 749 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 AC110994.2-201ENST00000635481 492 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 AL034408.1-202ENST00000636088 415 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
LRRC53A6NM62 AC068137.4-201ENST00000638485 296 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LRRC53A6NM62 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
LRRC53A6NM62 ZNF826P-207ENST00000622273 1910 ntBASIC3.54□□□□□ -1.84
LRRC53A6NM62 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
LRRC53A6NM62 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LRRC53A6NM62 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LRRC53A6NM62 OR1S2-201ENST00000302592 978 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 RNU5E-1-201ENST00000362477 120 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 RNU5A-1-201ENST00000362698 116 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 RNU4-75P-201ENST00000364621 146 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 AC110754.1-201ENST00000399740 601 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 AP000567.1-201ENST00000406413 156 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 RNU6ATAC-201ENST00000408749 126 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 ELOCP17-201ENST00000414751 326 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 HMGB3P23-201ENST00000414981 585 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 AC018630.2-202ENST00000422992 927 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 AC008850.1-201ENST00000427546 362 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 AC009961.2-201ENST00000435771 251 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 TPT1P7-201ENST00000458300 517 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LRRC53A6NM62 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 TRMT10BP1-201ENST00000519377 943 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 OR5B10P-201ENST00000532869 642 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 AF117829.1-206ENST00000621883 3802 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 AL392088.2-201ENST00000637607 285 ntBASIC3.53□□□□□ -1.84
LRRC53A6NM62 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.53□□□□□ -1.84
LRRC53A6NM62 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
LRRC53A6NM62 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LRRC53A6NM62 RNA5SP295-201ENST00000362655 121 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 U3.11-201ENST00000364476 212 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms