Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 AL512633.1-201ENST00000399931 655 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 RPL21P66-201ENST00000426566 466 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 AC092991.1-201ENST00000477176 376 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 RNU6-589P-201ENST00000516485 107 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 Y_RNA.712-201ENST00000517011 92 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 NACAP3-201ENST00000552100 481 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 IGBP1P1-201ENST00000554337 1009 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 RPL29P33-201ENST00000587474 316 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 AC011921.2-201ENST00000589465 152 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 AL590032.1-201ENST00000604920 252 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 AC013791.1-201ENST00000616619 62 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 TCL6_3.1-201ENST00000619064 137 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 AC020658.2-201ENST00000559030 4020 ntBASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 RNU6-942P-201ENST00000363002 107 ntBASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 RNA5SP140-201ENST00000364524 92 ntBASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 RNU6-147P-201ENST00000383983 107 ntBASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 ELOCP21-201ENST00000412558 336 ntBASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 RPL27AP8-201ENST00000424277 446 ntBASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 SNRPEP9-201ENST00000436794 238 ntBASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 SNRPCP3-201ENST00000474888 476 ntBASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 AF127577.6-201ENST00000623352 2191 ntBASIC7.19□□□□□ -1.26
SPDYE4A6NLX3 AC005332.5-201ENST00000591222 2919 ntBASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 MTND5P32-201ENST00000560711 1802 ntBASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 RNA5SP122-201ENST00000384457 108 ntBASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 RNA5SP475-201ENST00000410568 110 ntBASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 AL590383.1-201ENST00000428602 75 ntBASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 TRAPPC2P9-201ENST00000434556 343 ntBASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 AC100832.1-201ENST00000471945 383 ntBASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 AC140063.1-201ENST00000541343 259 ntBASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 MIR3646-201ENST00000578301 84 ntBASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 AC053481.4-201ENST00000583164 216 ntBASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 AC090132.2-201ENST00000615881 347 ntBASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 MIR3674-201ENST00000636576 68 ntBASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SPDYE4A6NLX3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 AC107027.3-201ENST00000565095 3473 ntBASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 SNORD35A-201ENST00000363389 86 ntBASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 Y_RNA.293-201ENST00000364908 93 ntBASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 RNU6-793P-201ENST00000384233 104 ntBASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 RN7SKP53-201ENST00000411337 315 ntBASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC7.17□□□□□ -1.26
SPDYE4A6NLX3 snoU13.6-201ENST00000458785 104 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms