Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 DUTP6-201ENST00000425573 462 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 MED14P1-201ENST00000430517 648 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 BX679664.1-201ENST00000434429 253 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AL513328.1-201ENST00000446460 224 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 ARL2BPP6-201ENST00000512757 439 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 MTCO2P32-201ENST00000514865 403 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AC018630.1-201ENST00000541376 925 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 MIR544B-201ENST00000582372 78 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AP001004.1-201ENST00000582468 324 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AP001330.4-201ENST00000604350 154 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AL365503.1-201ENST00000605247 905 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AC006023.2-201ENST00000609916 167 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 RMST_8.1-201ENST00000610287 165 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AL590808.1-201ENST00000618696 141 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 ASNSP3-201ENST00000451989 1306 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AF127577.6-201ENST00000623352 2191 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 FRG1BP-201ENST00000278882 761 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 AL031577.2-201ENST00000404133 280 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 RNA5SP129-201ENST00000410276 118 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 EZH2P1-201ENST00000431167 291 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 ZNF114P1-201ENST00000453500 292 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 CFTRP1-201ENST00000456646 183 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 AC010401.1-201ENST00000463867 348 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 AC078785.3-201ENST00000476607 425 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 AF131216.2-201ENST00000512316 564 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 SETP2-201ENST00000553886 926 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 ZNF192P1-203ENST00000565888 810 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 AL022099.1-201ENST00000604551 712 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 PLCE1P1-201ENST00000622094 305 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 AC006927.3-201ENST00000638789 384 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 AC092447.10-201ENST00000620607 1652 ntBASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF541Q9H0D2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
ZNF541Q9H0D2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
ZNF541Q9H0D2 AL445523.1-201ENST00000451184 1362 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 ELF2P3-201ENST00000445099 1506 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 RNU6-501P-201ENST00000364072 100 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 SNORD116-8-201ENST00000384365 95 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AC079780.1-201ENST00000428259 207 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 THAP5P1-201ENST00000439089 262 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 RAC1P7-201ENST00000445367 377 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AP000542.1-201ENST00000448473 371 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 RPS24P6-201ENST00000452670 400 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 RPS3P1-201ENST00000456781 192 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 RPL21P104-201ENST00000464143 478 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AC021382.1-201ENST00000483523 359 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 RN7SKP244-201ENST00000516513 307 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 HMGN1P28-201ENST00000521340 364 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 MTND4LP18-201ENST00000526864 291 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AC109446.2-201ENST00000567872 497 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AC013444.2-201ENST00000603317 787 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AC006254.3-201ENST00000603353 884 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AC106028.5-201ENST00000610332 395 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AC022079.1-201ENST00000621546 602 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AC079597.1-201ENST00000624306 508 ntBASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF541Q9H0D2 AC021755.1-201ENST00000559747 1447 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms