Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 VN1R91P-201ENST00000594377 169 ntBASIC4.79□□□□□ -1.64
CITED4Q96RK1 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.79□□□□□ -1.64
CITED4Q96RK1 SRGNP1-201ENST00000603392 451 ntBASIC4.79□□□□□ -1.64
CITED4Q96RK1 AC073046.2-201ENST00000604756 527 ntBASIC4.79□□□□□ -1.64
CITED4Q96RK1 AL096712.1-201ENST00000614561 159 ntBASIC4.79□□□□□ -1.64
CITED4Q96RK1 MIR6811-201ENST00000620409 58 ntBASIC4.79□□□□□ -1.64
CITED4Q96RK1 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
CITED4Q96RK1 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CITED4Q96RK1 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CITED4Q96RK1 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CITED4Q96RK1 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CITED4Q96RK1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CITED4Q96RK1 THAP12P9-201ENST00000503971 2360 ntBASIC4.78□□□□□ -1.64
CITED4Q96RK1 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CITED4Q96RK1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CITED4Q96RK1 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CITED4Q96RK1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CITED4Q96RK1 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CITED4Q96RK1 MT-TG-201ENST00000387429 68 ntBASIC4.78□□□□□ -1.64
CITED4Q96RK1 SNORA69.1-201ENST00000390904 137 ntBASIC4.78□□□□□ -1.64
CITED4Q96RK1 RN7SKP281-201ENST00000410472 352 ntBASIC4.78□□□□□ -1.64
CITED4Q96RK1 RN7SKP206-201ENST00000410823 293 ntBASIC4.78□□□□□ -1.64
CITED4Q96RK1 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 RPL17P36-201ENST00000420302 549 ntBASIC4.78□□□□□ -1.64
CITED4Q96RK1 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 AL512844.2-201ENST00000433990 593 ntBASIC4.78□□□□□ -1.64
CITED4Q96RK1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 AC005077.1-201ENST00000449226 375 ntBASIC4.78□□□□□ -1.64
CITED4Q96RK1 AL451050.1-201ENST00000450126 415 ntBASIC4.78□□□□□ -1.64
CITED4Q96RK1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 RPS26P39-201ENST00000469206 341 ntBASIC4.78□□□□□ -1.64
CITED4Q96RK1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 AC017037.1-201ENST00000508460 471 ntBASIC4.78□□□□□ -1.64
CITED4Q96RK1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CITED4Q96RK1 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 RPS29P30-201ENST00000600975 111 ntBASIC4.78□□□□□ -1.64
CITED4Q96RK1 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CITED4Q96RK1 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CITED4Q96RK1 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CITED4Q96RK1 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.78□□□□□ -1.64
CITED4Q96RK1 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CITED4Q96RK1 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.78□□□□□ -1.64
CITED4Q96RK1 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.65
CITED4Q96RK1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.65
CITED4Q96RK1 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CITED4Q96RK1 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 RNU6-595P-201ENST00000363944 107 ntBASIC4.77□□□□□ -1.65
CITED4Q96RK1 RNA5SP189-201ENST00000364920 115 ntBASIC4.77□□□□□ -1.65
CITED4Q96RK1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CITED4Q96RK1 Y_RNA.526-201ENST00000384572 110 ntBASIC4.77□□□□□ -1.65
CITED4Q96RK1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 MRPL53P1-201ENST00000414323 319 ntBASIC4.77□□□□□ -1.65
CITED4Q96RK1 RPL21P50-201ENST00000417698 477 ntBASIC4.77□□□□□ -1.65
CITED4Q96RK1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CITED4Q96RK1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CITED4Q96RK1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 AC010343.2-201ENST00000510162 224 ntBASIC4.77□□□□□ -1.65
CITED4Q96RK1 RNY3P15-201ENST00000516297 97 ntBASIC4.77□□□□□ -1.65
CITED4Q96RK1 RNU6-794P-201ENST00000517261 64 ntBASIC4.77□□□□□ -1.65
CITED4Q96RK1 AC012400.1-201ENST00000518452 381 ntBASIC4.77□□□□□ -1.65
CITED4Q96RK1 TPRX1P1-201ENST00000557620 319 ntBASIC4.77□□□□□ -1.65
CITED4Q96RK1 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 AL139124.1-201ENST00000609123 421 ntBASIC4.77□□□□□ -1.65
CITED4Q96RK1 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CITED4Q96RK1 AL137067.2-201ENST00000621202 131 ntBASIC4.77□□□□□ -1.65
CITED4Q96RK1 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CITED4Q96RK1 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.77□□□□□ -1.65
CITED4Q96RK1 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms