Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC009237.7-201ENST00000447357 229 ntBASIC6.03□□□□□ -1.44
LRCH3Q96II8 AC022493.1-201ENST00000492984 337 ntBASIC6.03□□□□□ -1.44
LRCH3Q96II8 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 AP006289.1-201ENST00000538089 277 ntBASIC6.03□□□□□ -1.44
LRCH3Q96II8 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 AC103996.1-201ENST00000555468 102 ntBASIC6.03□□□□□ -1.44
LRCH3Q96II8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 AC068724.3-201ENST00000625906 87 ntBASIC6.03□□□□□ -1.44
LRCH3Q96II8 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LRCH3Q96II8 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRCH3Q96II8 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRCH3Q96II8 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRCH3Q96II8 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LRCH3Q96II8 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.44
LRCH3Q96II8 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.02□□□□□ -1.45
LRCH3Q96II8 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.02□□□□□ -1.45
LRCH3Q96II8 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
LRCH3Q96II8 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRCH3Q96II8 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LRCH3Q96II8 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LRCH3Q96II8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRCH3Q96II8 AL590399.2-201ENST00000427536 309 ntBASIC6.02□□□□□ -1.45
LRCH3Q96II8 HMGB1P27-201ENST00000431429 603 ntBASIC6.02□□□□□ -1.45
LRCH3Q96II8 Z82188.1-201ENST00000436709 154 ntBASIC6.02□□□□□ -1.45
LRCH3Q96II8 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.02□□□□□ -1.45
LRCH3Q96II8 AC073264.2-201ENST00000448886 166 ntBASIC6.02□□□□□ -1.45
LRCH3Q96II8 snoU109.4-201ENST00000458953 143 ntBASIC6.02□□□□□ -1.45
LRCH3Q96II8 RPS29P27-201ENST00000463711 170 ntBASIC6.02□□□□□ -1.45
LRCH3Q96II8 RPS27AP9-201ENST00000477681 438 ntBASIC6.02□□□□□ -1.45
LRCH3Q96II8 FTH1P24-201ENST00000503502 462 ntBASIC6.02□□□□□ -1.45
LRCH3Q96II8 SUMO2P6-201ENST00000505273 288 ntBASIC6.02□□□□□ -1.45
LRCH3Q96II8 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.02□□□□□ -1.45
LRCH3Q96II8 SNORA25.12-201ENST00000516202 82 ntBASIC6.02□□□□□ -1.45
LRCH3Q96II8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC6.02□□□□□ -1.45
LRCH3Q96II8 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.02□□□□□ -1.45
LRCH3Q96II8 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.02□□□□□ -1.45
LRCH3Q96II8 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRCH3Q96II8 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.02□□□□□ -1.45
LRCH3Q96II8 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRCH3Q96II8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC6.02□□□□□ -1.45
LRCH3Q96II8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LRCH3Q96II8 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
LRCH3Q96II8 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
LRCH3Q96II8 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LRCH3Q96II8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.02□□□□□ -1.45
LRCH3Q96II8 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LRCH3Q96II8 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LRCH3Q96II8 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LRCH3Q96II8 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRCH3Q96II8 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LRCH3Q96II8 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LRCH3Q96II8 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 SNORA17.1-201ENST00000362945 126 ntBASIC6.01□□□□□ -1.45
LRCH3Q96II8 Y_RNA.217-201ENST00000364214 105 ntBASIC6.01□□□□□ -1.45
LRCH3Q96II8 MIR539-201ENST00000365690 78 ntBASIC6.01□□□□□ -1.45
LRCH3Q96II8 GNG5P2-201ENST00000372054 207 ntBASIC6.01□□□□□ -1.45
LRCH3Q96II8 RNU6-429P-201ENST00000384582 108 ntBASIC6.01□□□□□ -1.45
LRCH3Q96II8 SNORA20-201ENST00000384662 132 ntBASIC6.01□□□□□ -1.45
LRCH3Q96II8 AC009237.10-201ENST00000414112 510 ntBASIC6.01□□□□□ -1.45
LRCH3Q96II8 AL117339.3-201ENST00000418733 162 ntBASIC6.01□□□□□ -1.45
LRCH3Q96II8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 AC004975.1-201ENST00000428733 208 ntBASIC6.01□□□□□ -1.45
LRCH3Q96II8 RPS20P1-201ENST00000434853 354 ntBASIC6.01□□□□□ -1.45
LRCH3Q96II8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 Y_RNA.641-201ENST00000459414 105 ntBASIC6.01□□□□□ -1.45
LRCH3Q96II8 RPL21P129-201ENST00000491732 478 ntBASIC6.01□□□□□ -1.45
LRCH3Q96II8 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 OR4H12P-201ENST00000556269 907 ntBASIC6.01□□□□□ -1.45
LRCH3Q96II8 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC6.01□□□□□ -1.45
LRCH3Q96II8 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRCH3Q96II8 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRCH3Q96II8 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRCH3Q96II8 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
LRCH3Q96II8 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
LRCH3Q96II8 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6□□□□□ -1.45
LRCH3Q96II8 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6□□□□□ -1.45
LRCH3Q96II8 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6□□□□□ -1.45
LRCH3Q96II8 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms