Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC108032.1-201ENST00000416706 207 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 RBMY1KP-201ENST00000423480 476 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 RPS29P10-201ENST00000439197 166 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
IFT43Q96FT9 AL590399.6-201ENST00000446396 307 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 AC073850.1-201ENST00000449243 255 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.31□□□□□ -1.56
IFT43Q96FT9 AC012158.1-204ENST00000483430 465 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 AC083829.1-201ENST00000503756 657 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.31□□□□□ -1.56
IFT43Q96FT9 RPS4XP20-201ENST00000505751 772 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 AC006427.1-201ENST00000514359 712 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 RNU6-406P-201ENST00000516470 107 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 RNA5SP373-201ENST00000517271 95 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 AC008694.2-201ENST00000517591 306 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.31□□□□□ -1.56
IFT43Q96FT9 AC087369.1-201ENST00000520775 996 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.31□□□□□ -1.56
IFT43Q96FT9 MIR4700-201ENST00000578311 74 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.31□□□□□ -1.56
IFT43Q96FT9 AC011626.1-201ENST00000604710 562 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 AL160281.1-201ENST00000605307 311 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 AL591516.1-201ENST00000611326 274 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
IFT43Q96FT9 U73479.1-201ENST00000618062 168 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.31□□□□□ -1.56
IFT43Q96FT9 MIR6839-201ENST00000620425 113 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.31□□□□□ -1.56
IFT43Q96FT9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
IFT43Q96FT9 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
IFT43Q96FT9 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
IFT43Q96FT9 AC093591.2-201ENST00000565254 3843 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.31□□□□□ -1.56
IFT43Q96FT9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
IFT43Q96FT9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
IFT43Q96FT9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
IFT43Q96FT9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
IFT43Q96FT9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
IFT43Q96FT9 AP000542.2-201ENST00000623199 6179 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
IFT43Q96FT9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.3□□□□□ -1.56
IFT43Q96FT9 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
IFT43Q96FT9 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.3□□□□□ -1.56
IFT43Q96FT9 Y_RNA.214-201ENST00000364201 112 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 Y_RNA.376-201ENST00000365638 108 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 Y_RNA.526-201ENST00000384572 110 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 MIR550A3-201ENST00000390735 95 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.3□□□□□ -1.56
IFT43Q96FT9 RPS20P1-201ENST00000434853 354 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.3□□□□□ -1.56
IFT43Q96FT9 RPL12P3-201ENST00000440080 396 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 CHEK2P4-201ENST00000450340 246 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 MTCO3P8-201ENST00000453691 755 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 RPL39P38-201ENST00000467018 153 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 RPS18P6-201ENST00000476880 458 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 MTND3P25-201ENST00000509243 135 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 SNORD116-26-201ENST00000516006 96 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 RNU6-789P-201ENST00000517105 102 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 AC008489.1-201ENST00000524271 483 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 HSPE1P20-201ENST00000538133 289 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 AC024940.3-201ENST00000538551 316 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.3□□□□□ -1.56
IFT43Q96FT9 AL137100.2-201ENST00000555786 315 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 OR1M4P-201ENST00000589199 287 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 HMGB1P50-201ENST00000605814 607 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 AC005344.1-201ENST00000613391 459 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.3□□□□□ -1.56
IFT43Q96FT9 AP001005.3-201ENST00000622049 129 ntBASIC5.3□□□□□ -1.56
IFT43Q96FT9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
IFT43Q96FT9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.3□□□□□ -1.56
IFT43Q96FT9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.3□□□□□ -1.56
IFT43Q96FT9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
IFT43Q96FT9 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.3□□□□□ -1.56
IFT43Q96FT9 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
IFT43Q96FT9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
IFT43Q96FT9 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
IFT43Q96FT9 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
IFT43Q96FT9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
IFT43Q96FT9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
IFT43Q96FT9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
IFT43Q96FT9 AP001273.1-201ENST00000624493 3152 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
IFT43Q96FT9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
IFT43Q96FT9 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
IFT43Q96FT9 RNU6-76P-201ENST00000384060 104 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 Y_RNA.483-201ENST00000384380 101 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 Y_RNA.562-201ENST00000384695 113 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 RNU6-33P-201ENST00000384793 107 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 MIR578-201ENST00000384828 96 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 SNORD73A-201ENST00000386062 65 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 AL445529.1-201ENST00000398713 389 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 AP000580.1-201ENST00000404439 358 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 AL138885.1-201ENST00000405921 675 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 RNU2-38P-201ENST00000410856 79 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 AL030996.1-201ENST00000411430 235 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms