Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 RN7SKP57-201ENST00000517248 293 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AC018630.1-201ENST00000541376 925 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AC011611.1-201ENST00000552179 197 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AC010546.1-201ENST00000569391 485 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 MIR3913-1-201ENST00000577744 102 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 MIR3118-1-201ENST00000581787 76 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 NRBF2P1-201ENST00000587407 859 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AL031176.1-201ENST00000604554 466 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AL161729.4-201ENST00000604650 476 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AL391813.2-201ENST00000609113 322 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AC008498.1-201ENST00000613012 531 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AC013476.2-201ENST00000614456 459 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AC068792.1-201ENST00000621354 417 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AL136164.4-201ENST00000625013 2135 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 MTND5P26-201ENST00000426018 1752 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 RNU4-1-201ENST00000363925 141 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 CCNG1P1-201ENST00000406783 885 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 Y_RNA.619-201ENST00000410951 90 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 MTND1P21-201ENST00000412991 285 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 BEND7P1-201ENST00000422058 457 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AC233728.2-201ENST00000425348 757 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 ATP5JP1-201ENST00000431631 322 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AC025518.1-201ENST00000479856 347 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 RPL7P23-201ENST00000493874 747 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 RNU6-430P-201ENST00000517078 107 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AP000907.2-201ENST00000530827 353 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AL121576.1-201ENST00000556055 276 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AC245505.1-201ENST00000556398 224 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AC068790.3-201ENST00000602988 553 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 DUXAP4-201ENST00000603046 613 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AC006077.1-201ENST00000604746 343 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AC005000.2-201ENST00000605468 310 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 RNVU1-4-201ENST00000612985 164 ntBASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS52Q8N1B4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 RNU5A-6P-201ENST00000384136 116 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 RNU6-1215P-201ENST00000384441 102 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 MIR19A-201ENST00000384878 82 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 NDUFB4P4-201ENST00000404822 243 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 RNA5SP120-201ENST00000410900 112 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 DBIP2-201ENST00000419076 262 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 RPS3AP44-201ENST00000425466 790 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 FTH1P1-201ENST00000437933 532 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AC004801.2-202ENST00000463559 283 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AC114967.1-201ENST00000504890 259 ntBASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS52Q8N1B4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms