Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SIX5Q8N196 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
SIX5Q8N196 RNA5SP52-201ENST00000362448 134 ntBASIC5.43□□□□□ -1.54
SIX5Q8N196 RN7SKP95-201ENST00000362860 303 ntBASIC5.43□□□□□ -1.54
SIX5Q8N196 RNU6-173P-201ENST00000364215 104 ntBASIC5.43□□□□□ -1.54
SIX5Q8N196 RNA5SP505-201ENST00000364748 108 ntBASIC5.43□□□□□ -1.54
SIX5Q8N196 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SIX5Q8N196 AP000580.1-201ENST00000404439 358 ntBASIC5.43□□□□□ -1.54
SIX5Q8N196 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.43□□□□□ -1.54
SIX5Q8N196 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.43□□□□□ -1.54
SIX5Q8N196 AC093414.1-201ENST00000434712 514 ntBASIC5.43□□□□□ -1.54
SIX5Q8N196 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.43□□□□□ -1.54
SIX5Q8N196 OR2AQ1P-201ENST00000451972 200 ntBASIC5.43□□□□□ -1.54
SIX5Q8N196 AC092754.1-201ENST00000472975 479 ntBASIC5.43□□□□□ -1.54
SIX5Q8N196 HSPE1P6-201ENST00000479457 291 ntBASIC5.43□□□□□ -1.54
SIX5Q8N196 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.43□□□□□ -1.54
SIX5Q8N196 SNORA40.15-201ENST00000516884 107 ntBASIC5.43□□□□□ -1.54
SIX5Q8N196 AP000889.1-201ENST00000530968 660 ntBASIC5.43□□□□□ -1.54
SIX5Q8N196 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SIX5Q8N196 MIR4691-201ENST00000583764 85 ntBASIC5.43□□□□□ -1.54
SIX5Q8N196 AL353748.2-201ENST00000622148 471 ntBASIC5.43□□□□□ -1.54
SIX5Q8N196 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.43□□□□□ -1.54
SIX5Q8N196 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.43□□□□□ -1.54
SIX5Q8N196 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.43□□□□□ -1.54
SIX5Q8N196 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.43□□□□□ -1.54
SIX5Q8N196 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.43□□□□□ -1.54
SIX5Q8N196 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.43□□□□□ -1.54
SIX5Q8N196 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
SIX5Q8N196 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SIX5Q8N196 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SIX5Q8N196 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SIX5Q8N196 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SIX5Q8N196 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SIX5Q8N196 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SIX5Q8N196 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.42□□□□□ -1.54
SIX5Q8N196 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 AC009812.4-201ENST00000569134 1805 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 SDAD1P2-201ENST00000441308 2028 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIX5Q8N196 OR56A5-201ENST00000340110 738 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.42□□□□□ -1.54
SIX5Q8N196 SNORD1C-201ENST00000363315 78 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 Y_RNA.276-201ENST00000364732 109 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 Y_RNA.350-201ENST00000365409 98 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIX5Q8N196 CYCSP33-201ENST00000414485 327 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.42□□□□□ -1.54
SIX5Q8N196 BX276092.6-201ENST00000430476 250 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.42□□□□□ -1.54
SIX5Q8N196 RPS3AP46-201ENST00000448352 682 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 BX276092.8-201ENST00000455722 250 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 RNU6-1132P-201ENST00000459214 107 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 RNU7-169P-201ENST00000459456 61 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 FO393415.2-201ENST00000480085 343 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 AC108145.1-201ENST00000503770 153 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 SUMO2P6-201ENST00000505273 288 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 RNU6-513P-201ENST00000516104 104 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 MIR892C-201ENST00000516410 77 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.42□□□□□ -1.54
SIX5Q8N196 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SIX5Q8N196 AL157871.3-201ENST00000557231 293 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.42□□□□□ -1.54
SIX5Q8N196 HMGB3P26-201ENST00000560051 582 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 ATP5J2P6-201ENST00000565203 266 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 VN1R91P-201ENST00000594377 169 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 AL109918.3-201ENST00000603072 338 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 MIR3976-201ENST00000606807 139 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 MIR7703-201ENST00000620784 77 ntBASIC5.42□□□□□ -1.54
SIX5Q8N196 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIX5Q8N196 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.42□□□□□ -1.54
SIX5Q8N196 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.42□□□□□ -1.54
SIX5Q8N196 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.42□□□□□ -1.54
SIX5Q8N196 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIX5Q8N196 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.42□□□□□ -1.54
SIX5Q8N196 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SIX5Q8N196 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SIX5Q8N196 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SIX5Q8N196 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SIX5Q8N196 NEAT1-202ENST00000501122 22743 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.41□□□□□ -1.54
SIX5Q8N196 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SIX5Q8N196 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SIX5Q8N196 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.41□□□□□ -1.54
SIX5Q8N196 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SIX5Q8N196 RNU4-50P-201ENST00000364361 141 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 RNU6-512P-201ENST00000364438 103 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 RNU6-395P-201ENST00000365662 106 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 SNORA51.11-201ENST00000384442 131 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 Y_RNA.551-201ENST00000384661 102 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 MIR628-201ENST00000385229 95 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 AF186996.5-201ENST00000418098 904 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 AC073587.1-201ENST00000447093 876 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 AC073264.2-201ENST00000448886 166 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 CHEK2P4-201ENST00000450340 246 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 AC087588.1-201ENST00000462203 316 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 AC133134.1-201ENST00000466800 359 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 RN7SL188P-201ENST00000469842 285 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.41□□□□□ -1.54
SIX5Q8N196 AL049874.1-201ENST00000489560 388 ntBASIC5.41□□□□□ -1.54
SIX5Q8N196 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms