Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 RNA5SP88-201ENST00000365560 109 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 RPS3AP26-201ENST00000398259 784 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 MTCO1P17-201ENST00000411522 491 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC233728.2-201ENST00000425348 757 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC090774.1-201ENST00000435925 246 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 UBE2FP3-201ENST00000436366 524 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 AL008629.1-201ENST00000438615 184 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 RPL26P6-201ENST00000440913 438 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 AL592447.1-201ENST00000447592 540 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 ERHP1-201ENST00000523006 310 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 AP003461.1-201ENST00000528866 78 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC013828.2-201ENST00000532487 235 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 OR7K1P-201ENST00000546439 926 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC009094.1-201ENST00000564443 426 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC136618.2-201ENST00000575091 400 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC105224.1-201ENST00000587055 421 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 UBE2L4-201ENST00000587688 464 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 VN1R92P-201ENST00000598511 928 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 BNIP3P23-201ENST00000599655 511 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC004067.1-201ENST00000608733 700 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC072039.2-201ENST00000608883 439 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 AC006111.3-201ENST00000622137 383 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 AL158801.5-201ENST00000623123 465 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.63□□□□□ -1.99
SKA3Q8IX90 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SKA3Q8IX90 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.63□□□□□ -1.99
SKA3Q8IX90 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SKA3Q8IX90 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 AC104454.1-201ENST00000421341 1401 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 Y_RNA.302-201ENST00000364997 102 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 AL590084.2-201ENST00000401481 382 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 AC098592.1-201ENST00000419352 333 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 SNRPEP4-201ENST00000435815 279 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 AC112653.1-201ENST00000443851 386 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 AC117440.1-201ENST00000474107 571 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 RN7SL633P-201ENST00000488974 297 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 AC106872.3-201ENST00000495104 446 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 OR2A20P-203ENST00000498397 1268 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 MTND5P4-201ENST00000514978 288 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 SNORA70.24-201ENST00000517233 118 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 AC087276.1-201ENST00000529659 480 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 AP002404.1-201ENST00000532005 451 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 AC074050.1-201ENST00000563247 211 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 VN1R90P-201ENST00000595717 726 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 AP000811.1-201ENST00000603803 651 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 AC018714.1-201ENST00000605028 208 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 AC026790.2-201ENST00000606282 430 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 AP002826.1-201ENST00000608835 315 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 AC063944.3-201ENST00000609969 533 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 AP002791.1-201ENST00000623291 381 ntBASIC2.62□□□□□ -1.99
SKA3Q8IX90 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SKA3Q8IX90 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.62□□□□□ -1.99
SKA3Q8IX90 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SKA3Q8IX90 AC012321.1-201ENST00000561622 1588 ntBASIC2.61□□□□□ -1.99
SKA3Q8IX90 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.61□□□□□ -1.99
SKA3Q8IX90 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.61□□□□□ -1.99
SKA3Q8IX90 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SKA3Q8IX90 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SKA3Q8IX90 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.61□□□□□ -1.99
SKA3Q8IX90 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.61□□□□□ -1.99
SKA3Q8IX90 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.61□□□□□ -1.99
SKA3Q8IX90 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SKA3Q8IX90 RNU5E-8P-201ENST00000363502 116 ntBASIC2.61□□□□□ -1.99
SKA3Q8IX90 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SKA3Q8IX90 RNU6-76P-201ENST00000384060 104 ntBASIC2.61□□□□□ -1.99
SKA3Q8IX90 U3.20-201ENST00000390909 217 ntBASIC2.61□□□□□ -1.99
SKA3Q8IX90 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 233.3 ms