Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 U3.3-201ENST00000362986 216 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 RNU6-704P-201ENST00000364162 103 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 MIR613-201ENST00000385248 95 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 RNU6-817P-201ENST00000391083 104 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 RPL21P67-201ENST00000402896 478 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 MIR1298-201ENST00000408783 112 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 BX842559.1-201ENST00000419615 532 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 EIF4EP2-201ENST00000422816 654 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 AC009238.2-201ENST00000431026 355 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 RPL7P23-201ENST00000493874 747 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 DEFB108E-201ENST00000524692 240 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 EDDM3DP-201ENST00000554692 434 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 RPL21P7-201ENST00000557463 483 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 AC123786.2-201ENST00000603459 275 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 AL591926.8-201ENST00000616876 211 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 MIR6130-201ENST00000619419 109 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 AL450472.1-202ENST00000637286 180 ntBASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
SH3RF1Q7Z6J0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 Y_RNA.83-201ENST00000363005 113 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 RNU6-288P-201ENST00000363690 104 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 RNU6-371P-201ENST00000364283 108 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 RNU6-81P-201ENST00000365608 104 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 RNU6-339P-201ENST00000384310 107 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 MT-TC-201ENST00000387405 66 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 AL513475.1-201ENST00000406602 315 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 RNU6-325P-201ENST00000411132 105 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 AL139156.1-201ENST00000412785 841 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 AC006946.1-201ENST00000429106 328 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 RPL23AP25-201ENST00000430973 463 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 AL513124.1-201ENST00000450410 614 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 AC239809.1-201ENST00000450470 217 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 Y_RNA.644-201ENST00000459006 113 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 RN7SL189P-201ENST00000468631 289 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 Y_RNA.674-201ENST00000516362 113 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 AP006289.1-201ENST00000538089 277 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 ATP5J2P6-201ENST00000565203 266 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 MIR4737-201ENST00000583979 81 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 MZT1P2-201ENST00000604387 248 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 AP005432.2-201ENST00000608162 586 ntBASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SH3RF1Q7Z6J0 AC133552.1-201ENST00000569988 4007 ntBASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 Y_RNA.277-201ENST00000364754 102 ntBASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 HSPA8P15-201ENST00000401676 786 ntBASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 AL591034.2-201ENST00000402839 359 ntBASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 U3.32-201ENST00000408116 212 ntBASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 RPS29P26-201ENST00000477483 171 ntBASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 Y_RNA.713-201ENST00000517013 96 ntBASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 CPDP1-201ENST00000579660 283 ntBASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 AC008962.1-201ENST00000605729 304 ntBASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 SNORD39.4-201ENST00000620099 78 ntBASIC5.84□□□□□ -1.47
SH3RF1Q7Z6J0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.84□□□□□ -1.48
SH3RF1Q7Z6J0 AC004817.4-201ENST00000602396 3625 ntBASIC5.84□□□□□ -1.48
SH3RF1Q7Z6J0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SH3RF1Q7Z6J0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SH3RF1Q7Z6J0 BTBD10P1-201ENST00000549824 1352 ntBASIC5.83□□□□□ -1.48
SH3RF1Q7Z6J0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SH3RF1Q7Z6J0 Z75746.1-201ENST00000440243 2080 ntBASIC5.83□□□□□ -1.48
SH3RF1Q7Z6J0 AC079741.1-201ENST00000321498 212 ntBASIC5.83□□□□□ -1.48
SH3RF1Q7Z6J0 Y_RNA.269-201ENST00000364685 89 ntBASIC5.83□□□□□ -1.48
SH3RF1Q7Z6J0 RNA5SP90-201ENST00000364801 99 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms