Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AC026427.2-201ENST00000506228 536 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AP001893.2-201ENST00000526949 202 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AP001646.1-201ENST00000527936 915 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AK6P1-201ENST00000540219 478 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 Z84480.1-201ENST00000605131 311 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AC064801.1-201ENST00000612025 407 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AC073534.2-201ENST00000620377 381 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AC027514.1-201ENST00000588561 1603 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 FAM35BP-202ENST00000497389 3337 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 OR4G2P-201ENST00000328113 903 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 RPL32P3-201ENST00000359025 275 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 RNU6-270P-201ENST00000364131 105 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 U1.1-201ENST00000384101 164 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 MIR659-201ENST00000384963 97 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 RNU2-39P-201ENST00000410604 198 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 HMGB3P20-201ENST00000417997 600 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 RPL17P36-201ENST00000420302 549 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 C4BPAP2-201ENST00000428434 478 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 RPL23AP1-201ENST00000428990 471 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AF228730.2-201ENST00000438784 848 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 RPL35P6-201ENST00000490024 372 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AC010493.1-201ENST00000513479 292 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 RNU6-352P-201ENST00000516908 107 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AC011602.1-201ENST00000546484 331 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AL359212.1-201ENST00000556608 614 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 MIR6891-201ENST00000618788 93 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AC026585.1-201ENST00000619582 524 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AL589994.2-201ENST00000621124 579 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 CR381653.2-201ENST00000624041 768 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AC006065.6-201ENST00000625201 545 ntBASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PPP4R4Q6NUP7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 RNU1-32P-201ENST00000363937 159 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 Y_RNA.372-201ENST00000365599 102 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 RNU6-946P-201ENST00000383878 107 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 RNU6-217P-201ENST00000384164 104 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 SNORA24.1-201ENST00000384401 135 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 RNU6-1035P-201ENST00000384477 107 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 MIR129-1-201ENST00000384972 72 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 AL161631.1-201ENST00000417933 486 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 AL159169.1-201ENST00000421119 127 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 RPL7P5-201ENST00000471472 736 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 RN7SL860P-201ENST00000473738 223 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 AC011352.1-201ENST00000512300 793 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 RNU6-711P-201ENST00000517255 106 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 IGKV2-23-201ENST00000518729 323 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 AC103843.2-201ENST00000530523 682 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 AC084783.1-201ENST00000565846 910 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 AC053481.4-201ENST00000583164 216 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 AC006504.3-201ENST00000586818 523 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 AC136601.2-201ENST00000604356 474 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 MIR378J-201ENST00000611988 109 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 AC090517.2-201ENST00000614966 680 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 MIR8058-201ENST00000615737 89 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 208.8 ms