Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CHIC1Q5VXU3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
CHIC1Q5VXU3 AC024651.2-201ENST00000562480 2098 ntBASIC11.26□□□□□ -0.61
CHIC1Q5VXU3 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
CHIC1Q5VXU3 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CHIC1Q5VXU3 RNA5SP140-201ENST00000364524 92 ntBASIC11.25□□□□□ -0.61
CHIC1Q5VXU3 RN7SL83P-201ENST00000468131 297 ntBASIC11.25□□□□□ -0.61
CHIC1Q5VXU3 AL390198.2-201ENST00000510553 222 ntBASIC11.25□□□□□ -0.61
CHIC1Q5VXU3 AC007751.1-201ENST00000529260 376 ntBASIC11.25□□□□□ -0.61
CHIC1Q5VXU3 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC11.25□□□□□ -0.61
CHIC1Q5VXU3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC11.25□□□□□ -0.61
CHIC1Q5VXU3 SNX18P10-201ENST00000625014 519 ntBASIC11.25□□□□□ -0.61
CHIC1Q5VXU3 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
CHIC1Q5VXU3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CHIC1Q5VXU3 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CHIC1Q5VXU3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
CHIC1Q5VXU3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 AL008638.3-201ENST00000623027 5182 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 AC139713.2-214ENST00000642059 1811 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 Y_RNA.190-201ENST00000363964 101 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 RNA5-8SP4-201ENST00000365096 150 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 SNORD115-35-201ENST00000365122 82 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 RNU6-1280P-201ENST00000365211 107 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 AL136100.1-201ENST00000407696 330 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 SNORA11.3-201ENST00000408471 128 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 Y_RNA.611-201ENST00000410682 108 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 AC023818.1-201ENST00000498379 384 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 SCARNA5-201ENST00000516201 276 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 AP001781.1-201ENST00000530977 207 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 MIR5095-201ENST00000578844 88 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 MIR4662B-201ENST00000579498 81 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 RN7SL270P-201ENST00000579643 281 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 MIR3129-201ENST00000581095 76 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 AC118658.2-201ENST00000618697 459 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 SNORA11.6-201ENST00000619030 128 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 AC005514.1-201ENST00000623521 208 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 KCNMB3P1-202ENST00000493696 3389 ntBASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CHIC1Q5VXU3 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 RNU6-409P-201ENST00000384114 104 ntBASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 RNU6-938P-201ENST00000411285 103 ntBASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 RN7SL132P-201ENST00000478131 296 ntBASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 RNA5SP318-201ENST00000516352 92 ntBASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 MIR2681-201ENST00000581814 105 ntBASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 AC006133.1-201ENST00000617106 264 ntBASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC11.23□□□□□ -0.61
CHIC1Q5VXU3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 MT-TI-201ENST00000387365 69 ntBASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 Z82198.3-201ENST00000421145 199 ntBASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 AC004941.2-201ENST00000427009 228 ntBASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 RPS26P47-201ENST00000427219 348 ntBASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 MIR6889-201ENST00000613185 59 ntBASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CHIC1Q5VXU3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CHIC1Q5VXU3 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CHIC1Q5VXU3 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC11.21□□□□□ -0.61
CHIC1Q5VXU3 U8.12-201ENST00000384701 133 ntBASIC11.21□□□□□ -0.61
CHIC1Q5VXU3 BTF3P4-201ENST00000418852 495 ntBASIC11.21□□□□□ -0.61
CHIC1Q5VXU3 HMGN2P30-201ENST00000423237 256 ntBASIC11.21□□□□□ -0.61
CHIC1Q5VXU3 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms