Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 RNU2-62P-201ENST00000410868 191 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 RPS3AP3-201ENST00000411933 242 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 AC006366.1-201ENST00000422002 759 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.78□□□□□ -1.8
UBE3AQ05086 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.78□□□□□ -1.8
UBE3AQ05086 U3.44-201ENST00000458938 192 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 SNORD42A-201ENST00000459584 64 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 AC023598.1-201ENST00000472521 361 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 AC069499.1-201ENST00000489433 509 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 MTND4P2-201ENST00000507767 1203 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.78□□□□□ -1.8
UBE3AQ05086 RNU6-579P-201ENST00000516879 102 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 RNU6-64P-201ENST00000517119 105 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 RPL12P22-201ENST00000519073 490 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.78□□□□□ -1.8
UBE3AQ05086 AC123904.3-201ENST00000547218 814 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.78□□□□□ -1.8
UBE3AQ05086 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.78□□□□□ -1.8
UBE3AQ05086 RPL23AP84-201ENST00000571193 464 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.78□□□□□ -1.8
UBE3AQ05086 AP000254.1-201ENST00000609934 520 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 AC131902.3-201ENST00000611767 581 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 uc_338.12-201ENST00000616344 181 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
UBE3AQ05086 AC005858.4-201ENST00000623191 700 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 AL136313.1-201ENST00000624804 202 ntBASIC3.78□□□□□ -1.8
UBE3AQ05086 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.78□□□□□ -1.8
UBE3AQ05086 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UBE3AQ05086 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBE3AQ05086 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBE3AQ05086 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
UBE3AQ05086 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBE3AQ05086 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UBE3AQ05086 MFSD8-233ENST00000641482 4860 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBE3AQ05086 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBE3AQ05086 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBE3AQ05086 AL591034.1-201ENST00000407447 340 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 MTCO2P34-201ENST00000421994 607 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.77□□□□□ -1.81
UBE3AQ05086 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.77□□□□□ -1.81
UBE3AQ05086 AC087650.1-201ENST00000431445 468 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.77□□□□□ -1.81
UBE3AQ05086 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.77□□□□□ -1.81
UBE3AQ05086 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.77□□□□□ -1.81
UBE3AQ05086 AC005094.1-201ENST00000440420 368 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 PGBD4P3-201ENST00000440731 581 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 MTCO1P19-201ENST00000443487 500 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 MTND6P13-201ENST00000443510 523 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 USP9YP29-201ENST00000445112 563 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.77□□□□□ -1.81
UBE3AQ05086 MTND1P27-201ENST00000451117 902 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.77□□□□□ -1.81
UBE3AQ05086 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.77□□□□□ -1.81
UBE3AQ05086 RNU7-170P-201ENST00000459303 61 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 RPL31P60-201ENST00000478450 367 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 MTND1P3-201ENST00000484956 952 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 LARP1BP2-201ENST00000486594 519 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 TRBV12-2-201ENST00000489763 344 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 RNU6-390P-201ENST00000516259 103 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 Y_RNA.672-201ENST00000516289 104 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 RN7SKP209-201ENST00000516888 304 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.77□□□□□ -1.81
UBE3AQ05086 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.77□□□□□ -1.81
UBE3AQ05086 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.77□□□□□ -1.81
UBE3AQ05086 AL355836.1-201ENST00000555951 870 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.77□□□□□ -1.81
UBE3AQ05086 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.77□□□□□ -1.81
UBE3AQ05086 AC006362.1-201ENST00000567392 174 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.77□□□□□ -1.81
UBE3AQ05086 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.77□□□□□ -1.81
UBE3AQ05086 AP001506.1-201ENST00000615444 211 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 AC010133.1-201ENST00000615809 842 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 MIR7112-201ENST00000616126 65 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UBE3AQ05086 TEX21P-201ENST00000447107 1476 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.77□□□□□ -1.81
UBE3AQ05086 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.77□□□□□ -1.81
UBE3AQ05086 AC008568.2-201ENST00000623862 2313 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 AC002546.1-201ENST00000588041 2504 ntBASIC3.77□□□□□ -1.81
UBE3AQ05086 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.77□□□□□ -1.81
UBE3AQ05086 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.76□□□□□ -1.81
UBE3AQ05086 OR4G2P-202ENST00000641004 1759 ntBASIC3.76□□□□□ -1.81
UBE3AQ05086 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UBE3AQ05086 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
UBE3AQ05086 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
UBE3AQ05086 MIR514A1-201ENST00000385133 98 ntBASIC3.76□□□□□ -1.81
UBE3AQ05086 SNORA48.5-201ENST00000391143 135 ntBASIC3.76□□□□□ -1.81
UBE3AQ05086 U3.42-201ENST00000408746 214 ntBASIC3.76□□□□□ -1.81
UBE3AQ05086 DBIP2-201ENST00000419076 262 ntBASIC3.76□□□□□ -1.81
UBE3AQ05086 RPS15AP12-201ENST00000419498 388 ntBASIC3.76□□□□□ -1.81
UBE3AQ05086 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.76□□□□□ -1.81
UBE3AQ05086 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.76□□□□□ -1.81
UBE3AQ05086 AL356867.1-201ENST00000429623 299 ntBASIC3.76□□□□□ -1.81
UBE3AQ05086 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.76□□□□□ -1.81
UBE3AQ05086 AC010153.1-201ENST00000432862 727 ntBASIC3.76□□□□□ -1.81
UBE3AQ05086 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.76□□□□□ -1.81
UBE3AQ05086 AL022238.1-201ENST00000442557 355 ntBASIC3.76□□□□□ -1.81
UBE3AQ05086 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms