Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.04□□□□□ -1.92
CX3CL1P78423 TTC39CP1-201ENST00000512513 755 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 RN7SKP21-201ENST00000516503 220 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 RNA5SP164-201ENST00000516533 110 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 RNU7-51P-201ENST00000516560 62 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 DUXAP2-201ENST00000519198 589 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.04□□□□□ -1.92
CX3CL1P78423 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CL1P78423 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.04□□□□□ -1.92
CX3CL1P78423 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CX3CL1P78423 CYCSP30-201ENST00000546447 172 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AC124947.2-202ENST00000552735 133 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AL121576.1-201ENST00000556055 276 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.04□□□□□ -1.92
CX3CL1P78423 GLUD1P4-201ENST00000590914 418 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AC013553.2-201ENST00000604244 589 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AC067959.1-201ENST00000604334 379 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AC015540.1-201ENST00000615828 501 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AC136475.10-201ENST00000620253 385 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.04□□□□□ -1.92
CX3CL1P78423 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AL392088.2-201ENST00000637607 285 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.04□□□□□ -1.92
CX3CL1P78423 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
CX3CL1P78423 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CL1P78423 ZNF807-201ENST00000328088 1707 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CX3CL1P78423 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.03□□□□□ -1.92
CX3CL1P78423 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CX3CL1P78423 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CL1P78423 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CL1P78423 AL021368.2-201ENST00000606125 5352 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.03□□□□□ -1.92
CX3CL1P78423 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CL1P78423 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.03□□□□□ -1.92
CX3CL1P78423 MTND5P26-201ENST00000426018 1752 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.03□□□□□ -1.92
CX3CL1P78423 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CL1P78423 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CL1P78423 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CX3CL1P78423 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.03□□□□□ -1.92
CX3CL1P78423 RNU6-259P-201ENST00000383999 107 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 RNU5A-6P-201ENST00000384136 116 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 RN7SKP263-201ENST00000411194 309 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 AL513331.1-201ENST00000411908 397 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.03□□□□□ -1.92
CX3CL1P78423 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.03□□□□□ -1.92
CX3CL1P78423 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.03□□□□□ -1.92
CX3CL1P78423 OR2AS1P-201ENST00000427827 319 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.03□□□□□ -1.92
CX3CL1P78423 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.03□□□□□ -1.92
CX3CL1P78423 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.03□□□□□ -1.92
CX3CL1P78423 MTCYBP1-201ENST00000454315 1119 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 RPS3AP17-201ENST00000472594 777 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.03□□□□□ -1.92
CX3CL1P78423 RN7SL432P-201ENST00000484057 298 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 RPL7P47-201ENST00000497299 556 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 RPL37P25-201ENST00000507308 276 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 SCARNA24.1-201ENST00000516465 137 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 RN7SKP83-201ENST00000516512 178 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 RN7SKP258-201ENST00000517151 304 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 IGKV2-23-201ENST00000518729 323 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 AC090572.1-201ENST00000519251 160 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 HMGB1P41-201ENST00000520234 440 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 SUMO2P20-201ENST00000520803 283 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 AC022695.1-201ENST00000522089 237 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.03□□□□□ -1.92
CX3CL1P78423 MIR3160-1-201ENST00000577972 85 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.03□□□□□ -1.92
CX3CL1P78423 BRDTP1-201ENST00000605735 677 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 AP002360.4-201ENST00000606980 481 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 AC244100.1-202ENST00000621554 382 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 AL354798.1-201ENST00000622505 329 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.03□□□□□ -1.92
CX3CL1P78423 LRRC77P-213ENST00000637727 880 ntBASIC3.03□□□□□ -1.92
CX3CL1P78423 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CL1P78423 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CL1P78423 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.03□□□□□ -1.92
CX3CL1P78423 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CX3CL1P78423 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CL1P78423 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CX3CL1P78423 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
CX3CL1P78423 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CX3CL1P78423 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CX3CL1P78423 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.02□□□□□ -1.93
CX3CL1P78423 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
CX3CL1P78423 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CX3CL1P78423 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CX3CL1P78423 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CX3CL1P78423 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.02□□□□□ -1.93
CX3CL1P78423 Y_RNA.41-201ENST00000362646 102 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 RNU6-701P-201ENST00000384059 107 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 U1.1-201ENST00000384101 164 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms