Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNU4-51P-201ENST00000364206 140 ntBASIC2.68□□□□□ -1.98
CDH4P55283 SNORA36C-201ENST00000384289 132 ntBASIC2.68□□□□□ -1.98
CDH4P55283 AL139039.1-201ENST00000401900 692 ntBASIC2.68□□□□□ -1.98
CDH4P55283 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH4P55283 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.68□□□□□ -1.98
CDH4P55283 AL449283.1-202ENST00000418249 604 ntBASIC2.68□□□□□ -1.98
CDH4P55283 AC008850.1-201ENST00000427546 362 ntBASIC2.68□□□□□ -1.98
CDH4P55283 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH4P55283 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH4P55283 AC011816.1-201ENST00000441346 546 ntBASIC2.68□□□□□ -1.98
CDH4P55283 AC009296.1-201ENST00000443146 155 ntBASIC2.68□□□□□ -1.98
CDH4P55283 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH4P55283 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH4P55283 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH4P55283 ARPC3P5-201ENST00000448802 534 ntBASIC2.68□□□□□ -1.98
CDH4P55283 AC092155.2-201ENST00000454675 477 ntBASIC2.68□□□□□ -1.98
CDH4P55283 AL109741.2-201ENST00000455561 343 ntBASIC2.68□□□□□ -1.98
CDH4P55283 BX322784.1-201ENST00000455793 1077 ntBASIC2.68□□□□□ -1.98
CDH4P55283 RPS27AP9-201ENST00000477681 438 ntBASIC2.68□□□□□ -1.98
CDH4P55283 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.68□□□□□ -1.98
CDH4P55283 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH4P55283 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH4P55283 SNORA19.3-201ENST00000516165 130 ntBASIC2.68□□□□□ -1.98
CDH4P55283 SCARNA15.2-201ENST00000516409 127 ntBASIC2.68□□□□□ -1.98
CDH4P55283 AC100870.1-201ENST00000522035 505 ntBASIC2.68□□□□□ -1.98
CDH4P55283 MTCO1P47-201ENST00000523889 1271 ntBASIC2.68□□□□□ -1.98
CDH4P55283 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.68□□□□□ -1.98
CDH4P55283 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH4P55283 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH4P55283 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH4P55283 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH4P55283 AC004852.3-201ENST00000614131 326 ntBASIC2.68□□□□□ -1.98
CDH4P55283 MIR6852-201ENST00000621699 66 ntBASIC2.68□□□□□ -1.98
CDH4P55283 MIR6733-201ENST00000635723 61 ntBASIC2.68□□□□□ -1.98
CDH4P55283 AC138915.1-201ENST00000565427 1685 ntBASIC2.68□□□□□ -1.98
CDH4P55283 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.68□□□□□ -1.98
CDH4P55283 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.68□□□□□ -1.98
CDH4P55283 AL079343.1-201ENST00000572358 1771 ntBASIC2.67□□□□□ -1.98
CDH4P55283 NACA3P-201ENST00000359690 648 ntBASIC2.67□□□□□ -1.98
CDH4P55283 SNORD62.1-201ENST00000362541 86 ntBASIC2.67□□□□□ -1.98
CDH4P55283 RNU1-105P-201ENST00000363470 161 ntBASIC2.67□□□□□ -1.98
CDH4P55283 RNU1-100P-201ENST00000365255 165 ntBASIC2.67□□□□□ -1.98
CDH4P55283 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CDH4P55283 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CDH4P55283 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CDH4P55283 RNU6-952P-201ENST00000391164 108 ntBASIC2.67□□□□□ -1.98
CDH4P55283 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH4P55283 RPS4XP8-201ENST00000402039 771 ntBASIC2.67□□□□□ -1.98
CDH4P55283 Z85995.1-201ENST00000415547 335 ntBASIC2.67□□□□□ -1.98
CDH4P55283 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH4P55283 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.67□□□□□ -1.98
CDH4P55283 DDX3P2-201ENST00000446138 111 ntBASIC2.67□□□□□ -1.98
CDH4P55283 MRPL50P4-201ENST00000446432 475 ntBASIC2.67□□□□□ -1.98
CDH4P55283 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH4P55283 AC097493.1-201ENST00000463958 372 ntBASIC2.67□□□□□ -1.98
CDH4P55283 RPL31P50-201ENST00000471002 296 ntBASIC2.67□□□□□ -1.98
CDH4P55283 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.67□□□□□ -1.98
CDH4P55283 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH4P55283 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH4P55283 AC006499.2-201ENST00000513470 337 ntBASIC2.67□□□□□ -1.98
CDH4P55283 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH4P55283 RNU6-276P-201ENST00000516114 96 ntBASIC2.67□□□□□ -1.98
CDH4P55283 RNU6-714P-201ENST00000516963 103 ntBASIC2.67□□□□□ -1.98
CDH4P55283 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.67□□□□□ -1.98
CDH4P55283 AP002748.2-201ENST00000528671 348 ntBASIC2.67□□□□□ -1.98
CDH4P55283 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH4P55283 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH4P55283 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH4P55283 MIR4672-201ENST00000583126 81 ntBASIC2.67□□□□□ -1.98
CDH4P55283 AL606834.3-201ENST00000602615 496 ntBASIC2.67□□□□□ -1.98
CDH4P55283 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH4P55283 AL357080.1-201ENST00000617394 239 ntBASIC2.67□□□□□ -1.98
CDH4P55283 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.67□□□□□ -1.98
CDH4P55283 AL159972.1-201ENST00000625150 448 ntBASIC2.67□□□□□ -1.98
CDH4P55283 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDH4P55283 AL049641.1-201ENST00000441055 1948 ntBASIC2.67□□□□□ -1.98
CDH4P55283 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
CDH4P55283 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDH4P55283 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CDH4P55283 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.66□□□□□ -1.98
CDH4P55283 SDAD1P2-201ENST00000441308 2028 ntBASIC2.66□□□□□ -1.98
CDH4P55283 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CDH4P55283 AC007785.2-201ENST00000598627 1916 ntBASIC2.66□□□□□ -1.98
CDH4P55283 AL161431.1-201ENST00000618966 4205 ntBASIC2.66□□□□□ -1.98
CDH4P55283 AL672167.1-206ENST00000356293 943 ntBASIC2.66□□□□□ -1.98
CDH4P55283 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CDH4P55283 RNU5E-8P-201ENST00000363502 116 ntBASIC2.66□□□□□ -1.98
CDH4P55283 RNU6-343P-201ENST00000364709 104 ntBASIC2.66□□□□□ -1.98
CDH4P55283 RNU6-1180P-201ENST00000364935 107 ntBASIC2.66□□□□□ -1.98
CDH4P55283 MIR767-201ENST00000390228 109 ntBASIC2.66□□□□□ -1.98
CDH4P55283 USP9YP20-201ENST00000419224 558 ntBASIC2.66□□□□□ -1.98
CDH4P55283 AC099548.1-201ENST00000421443 426 ntBASIC2.66□□□□□ -1.98
CDH4P55283 BX119904.4-201ENST00000424402 301 ntBASIC2.66□□□□□ -1.98
CDH4P55283 AC009414.1-201ENST00000427200 443 ntBASIC2.66□□□□□ -1.98
CDH4P55283 RPL23AP76-201ENST00000441860 458 ntBASIC2.66□□□□□ -1.98
CDH4P55283 AC008571.1-201ENST00000467232 300 ntBASIC2.66□□□□□ -1.98
CDH4P55283 LARP1BP2-201ENST00000486594 519 ntBASIC2.66□□□□□ -1.98
CDH4P55283 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.66□□□□□ -1.98
CDH4P55283 AC112206.4-201ENST00000515142 405 ntBASIC2.66□□□□□ -1.98
CDH4P55283 RNU6-1282P-201ENST00000516735 96 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms