Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.77□□□□□ -1.65
CCNFP41002 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.77□□□□□ -1.65
CCNFP41002 AL158196.1-201ENST00000616786 434 ntBASIC4.77□□□□□ -1.65
CCNFP41002 EOGT-210ENST00000615922 1931 ntBASIC4.77□□□□□ -1.65
CCNFP41002 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCNFP41002 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCNFP41002 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.77□□□□□ -1.65
CCNFP41002 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCNFP41002 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCNFP41002 AL365440.1-201ENST00000436135 2167 ntBASIC4.77□□□□□ -1.65
CCNFP41002 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.77□□□□□ -1.65
CCNFP41002 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
CCNFP41002 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCNFP41002 OR14L1P-202ENST00000641545 3009 ntBASIC4.76□□□□□ -1.65
CCNFP41002 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCNFP41002 HSPA8P4-201ENST00000511877 1920 ntBASIC4.76□□□□□ -1.65
CCNFP41002 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCNFP41002 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCNFP41002 OR5P1P-201ENST00000299512 925 ntBASIC4.76□□□□□ -1.65
CCNFP41002 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CCNFP41002 U3.15-201ENST00000365398 212 ntBASIC4.76□□□□□ -1.65
CCNFP41002 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCNFP41002 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCNFP41002 Y_RNA.399-201ENST00000383955 105 ntBASIC4.76□□□□□ -1.65
CCNFP41002 Y_RNA.473-201ENST00000384333 102 ntBASIC4.76□□□□□ -1.65
CCNFP41002 RNU4-25P-201ENST00000410569 230 ntBASIC4.76□□□□□ -1.65
CCNFP41002 AL645608.4-201ENST00000423619 154 ntBASIC4.76□□□□□ -1.65
CCNFP41002 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.76□□□□□ -1.65
CCNFP41002 AC093414.1-201ENST00000434712 514 ntBASIC4.76□□□□□ -1.65
CCNFP41002 AL137792.2-201ENST00000443484 235 ntBASIC4.76□□□□□ -1.65
CCNFP41002 AC112498.1-201ENST00000444401 332 ntBASIC4.76□□□□□ -1.65
CCNFP41002 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.76□□□□□ -1.65
CCNFP41002 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.76□□□□□ -1.65
CCNFP41002 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.76□□□□□ -1.65
CCNFP41002 KPNA2P1-201ENST00000458289 1591 ntBASIC4.76□□□□□ -1.65
CCNFP41002 snoU13.20-201ENST00000459180 104 ntBASIC4.76□□□□□ -1.65
CCNFP41002 AC117503.1-201ENST00000472241 394 ntBASIC4.76□□□□□ -1.65
CCNFP41002 MRPS33P2-201ENST00000507850 322 ntBASIC4.76□□□□□ -1.65
CCNFP41002 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.76□□□□□ -1.65
CCNFP41002 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCNFP41002 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.76□□□□□ -1.65
CCNFP41002 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCNFP41002 AC090510.2-201ENST00000617465 629 ntBASIC4.76□□□□□ -1.65
CCNFP41002 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCNFP41002 AL078596.1-201ENST00000624856 447 ntBASIC4.76□□□□□ -1.65
CCNFP41002 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.76□□□□□ -1.65
CCNFP41002 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCNFP41002 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CCNFP41002 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCNFP41002 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
CCNFP41002 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCNFP41002 AL133243.3-201ENST00000617415 3004 ntBASIC4.75□□□□□ -1.65
CCNFP41002 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.75□□□□□ -1.65
CCNFP41002 AC074029.4-201ENST00000624796 1859 ntBASIC4.75□□□□□ -1.65
CCNFP41002 SAMMSON-226ENST00000642089 1582 ntBASIC4.75□□□□□ -1.65
CCNFP41002 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCNFP41002 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCNFP41002 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CCNFP41002 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCNFP41002 AC114755.2-201ENST00000413520 361 ntBASIC4.75□□□□□ -1.65
CCNFP41002 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.75□□□□□ -1.65
CCNFP41002 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
CCNFP41002 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.75□□□□□ -1.65
CCNFP41002 AL160004.2-201ENST00000432935 350 ntBASIC4.75□□□□□ -1.65
CCNFP41002 AL591212.2-201ENST00000433923 257 ntBASIC4.75□□□□□ -1.65
CCNFP41002 RPS17P8-201ENST00000434525 335 ntBASIC4.75□□□□□ -1.65
CCNFP41002 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.75□□□□□ -1.65
CCNFP41002 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.75□□□□□ -1.65
CCNFP41002 RNU6-953P-201ENST00000459154 107 ntBASIC4.75□□□□□ -1.65
CCNFP41002 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.75□□□□□ -1.65
CCNFP41002 RPS27AP13-201ENST00000498403 237 ntBASIC4.75□□□□□ -1.65
CCNFP41002 AC079140.5-201ENST00000507882 310 ntBASIC4.75□□□□□ -1.65
CCNFP41002 RNU6-1069P-201ENST00000516612 133 ntBASIC4.75□□□□□ -1.65
CCNFP41002 RNU6-1016P-201ENST00000516689 94 ntBASIC4.75□□□□□ -1.65
CCNFP41002 RNU1-54P-201ENST00000517181 120 ntBASIC4.75□□□□□ -1.65
CCNFP41002 RN7SKP295-201ENST00000517264 153 ntBASIC4.75□□□□□ -1.65
CCNFP41002 CDH12P4-201ENST00000517835 295 ntBASIC4.75□□□□□ -1.65
CCNFP41002 CDH12P3-201ENST00000517935 295 ntBASIC4.75□□□□□ -1.65
CCNFP41002 CDH12P1-201ENST00000518435 295 ntBASIC4.75□□□□□ -1.65
CCNFP41002 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.75□□□□□ -1.65
CCNFP41002 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.75□□□□□ -1.65
CCNFP41002 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.75□□□□□ -1.65
CCNFP41002 AL355836.1-201ENST00000555951 870 ntBASIC4.75□□□□□ -1.65
CCNFP41002 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.75□□□□□ -1.65
CCNFP41002 AC174048.1-201ENST00000603389 144 ntBASIC4.75□□□□□ -1.65
CCNFP41002 AL121932.1-201ENST00000605542 214 ntBASIC4.75□□□□□ -1.65
CCNFP41002 AC092608.2-201ENST00000624427 218 ntBASIC4.75□□□□□ -1.65
CCNFP41002 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.75□□□□□ -1.65
CCNFP41002 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCNFP41002 IRF5P1-201ENST00000504852 2164 ntBASIC4.75□□□□□ -1.65
CCNFP41002 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CCNFP41002 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.75□□□□□ -1.65
CCNFP41002 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CCNFP41002 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCNFP41002 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCNFP41002 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CCNFP41002 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.74□□□□□ -1.65
CCNFP41002 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCNFP41002 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCNFP41002 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms