Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AP004242.1-201ENST00000533701 349 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.08□□□□□ -2.08
COL5A1P20908 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL5A1P20908 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.08□□□□□ -2.08
COL5A1P20908 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.08□□□□□ -2.08
COL5A1P20908 BNIP3P24-201ENST00000593398 557 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 NIFKP6-201ENST00000598115 845 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.08□□□□□ -2.08
COL5A1P20908 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
COL5A1P20908 AC021755.4-201ENST00000616620 456 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 MIR6132-201ENST00000622083 109 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.08□□□□□ -2.08
COL5A1P20908 AC012321.1-201ENST00000561622 1588 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 AL161431.1-201ENST00000618966 4205 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
COL5A1P20908 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
COL5A1P20908 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
COL5A1P20908 AL109809.4-201ENST00000603520 2185 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 RNU6-1214P-201ENST00000363650 109 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 snoZ40.1-201ENST00000364540 72 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 SNORA25.9-201ENST00000365087 128 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 RNU1-51P-201ENST00000365345 176 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 OR5H15-201ENST00000383696 930 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 SNORA26.9-201ENST00000391322 122 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.07□□□□□ -2.08
COL5A1P20908 RNU2-42P-201ENST00000410697 113 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.07□□□□□ -2.08
COL5A1P20908 ELOCP9-201ENST00000418624 239 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.07□□□□□ -2.08
COL5A1P20908 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.07□□□□□ -2.08
COL5A1P20908 RPL21P2-201ENST00000440049 481 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 SEPT14P24-201ENST00000447236 180 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.07□□□□□ -2.08
COL5A1P20908 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.07□□□□□ -2.08
COL5A1P20908 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.07□□□□□ -2.08
COL5A1P20908 AC084024.2-201ENST00000503480 791 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.07□□□□□ -2.08
COL5A1P20908 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.07□□□□□ -2.08
COL5A1P20908 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.07□□□□□ -2.08
COL5A1P20908 MTATP6P15-201ENST00000527233 835 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.07□□□□□ -2.08
COL5A1P20908 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.07□□□□□ -2.08
COL5A1P20908 AC023824.3-201ENST00000569003 562 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 MTND4LP24-201ENST00000572277 291 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AC008088.1-201ENST00000580993 280 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.07□□□□□ -2.08
COL5A1P20908 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.07□□□□□ -2.08
COL5A1P20908 AC090525.3-201ENST00000605601 189 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.07□□□□□ -2.08
COL5A1P20908 PART1_2.1-201ENST00000612397 250 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.07□□□□□ -2.08
COL5A1P20908 AC093591.3-201ENST00000634516 308 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AC087821.2-201ENST00000637086 450 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.07□□□□□ -2.08
COL5A1P20908 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL5A1P20908 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.07□□□□□ -2.08
COL5A1P20908 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL5A1P20908 RNY1P10-201ENST00000363268 113 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 RNU6-83P-201ENST00000384568 112 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 RNU2-37P-201ENST00000410695 177 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.07□□□□□ -2.08
COL5A1P20908 LUZP4P1-201ENST00000415420 344 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.07□□□□□ -2.08
COL5A1P20908 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.07□□□□□ -2.08
COL5A1P20908 AC027644.1-201ENST00000419595 298 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 TXNL1P1-201ENST00000429528 554 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.07□□□□□ -2.08
COL5A1P20908 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.07□□□□□ -2.08
COL5A1P20908 AC084290.1-201ENST00000434995 374 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 TRIM60P18-201ENST00000441518 828 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 RPL39P40-201ENST00000445481 146 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 PTENP1-201ENST00000447117 1215 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AC007327.1-201ENST00000447461 264 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.07□□□□□ -2.08
COL5A1P20908 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL5A1P20908 TRBV26-201ENST00000456572 344 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.07□□□□□ -2.08
COL5A1P20908 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.07□□□□□ -2.08
COL5A1P20908 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.07□□□□□ -2.08
COL5A1P20908 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.07□□□□□ -2.08
COL5A1P20908 TBCAP3-201ENST00000512475 312 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.07□□□□□ -2.08
COL5A1P20908 RNU5A-4P-201ENST00000516588 111 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 MTCO1P47-201ENST00000523889 1271 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.07□□□□□ -2.08
COL5A1P20908 NIFKP8-201ENST00000560500 874 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.07□□□□□ -2.08
COL5A1P20908 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.07□□□□□ -2.08
COL5A1P20908 AL356575.1-201ENST00000603008 283 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 Z99497.2-201ENST00000603634 310 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AC009237.15-201ENST00000610252 501 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AC092106.3-201ENST00000611308 722 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AC245517.5-201ENST00000611529 162 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AC010378.1-201ENST00000619270 362 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AL157770.1-201ENST00000623049 439 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AC120349.3-201ENST00000624377 529 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 CU459211.1-201ENST00000635667 749 ntBASIC2.07□□□□□ -2.08
COL5A1P20908 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
COL5A1P20908 AC111188.2-201ENST00000529697 1387 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms