Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC074250.1-201ENST00000511117 192 ntBASIC3.54□□□□□ -1.84
CAPN3P20807 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.54□□□□□ -1.84
CAPN3P20807 RNU6-759P-201ENST00000516740 103 ntBASIC3.54□□□□□ -1.84
CAPN3P20807 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CAPN3P20807 AC123904.2-201ENST00000548059 300 ntBASIC3.54□□□□□ -1.84
CAPN3P20807 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.54□□□□□ -1.84
CAPN3P20807 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.54□□□□□ -1.84
CAPN3P20807 MTCO3P24-201ENST00000572729 782 ntBASIC3.54□□□□□ -1.84
CAPN3P20807 MIR4513-201ENST00000581077 86 ntBASIC3.54□□□□□ -1.84
CAPN3P20807 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.54□□□□□ -1.84
CAPN3P20807 RMST_8.1-201ENST00000610287 165 ntBASIC3.54□□□□□ -1.84
CAPN3P20807 AC120349.3-201ENST00000624377 529 ntBASIC3.54□□□□□ -1.84
CAPN3P20807 SCARNA15.3-201ENST00000626315 122 ntBASIC3.54□□□□□ -1.84
CAPN3P20807 SCARNA4.1-201ENST00000628597 123 ntBASIC3.54□□□□□ -1.84
CAPN3P20807 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.54□□□□□ -1.84
CAPN3P20807 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CAPN3P20807 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CAPN3P20807 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CAPN3P20807 AC008669.1-201ENST00000565823 2178 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 AC092104.1-201ENST00000497346 1441 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CAPN3P20807 RNU1-105P-201ENST00000363470 161 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 RNA5SP42-201ENST00000364278 115 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 Y_RNA.245-201ENST00000364493 95 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 RNU5E-5P-201ENST00000365379 116 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 RNY3P13-201ENST00000365542 102 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 RNU6-140P-201ENST00000384566 108 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 MIR184-201ENST00000384962 84 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 SNORA3.3-201ENST00000408712 125 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 HSFY4P-201ENST00000415994 1181 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.53□□□□□ -1.84
CAPN3P20807 AC137499.1-201ENST00000427602 88 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 FTH1P25-201ENST00000447665 469 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 USP9YP12-201ENST00000450481 570 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 MTND1P12-201ENST00000455231 147 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 AC004801.2-202ENST00000463559 283 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 AC068724.1-201ENST00000487100 792 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 FCF1P3-201ENST00000496394 590 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 AL358832.1-201ENST00000497800 389 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CAPN3P20807 AC138853.1-201ENST00000503549 823 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.53□□□□□ -1.84
CAPN3P20807 HMGN1P11-201ENST00000508668 303 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.53□□□□□ -1.84
CAPN3P20807 SCARNA14-201ENST00000516903 136 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 RNU6-352P-201ENST00000516908 107 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.53□□□□□ -1.84
CAPN3P20807 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.53□□□□□ -1.84
CAPN3P20807 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.53□□□□□ -1.84
CAPN3P20807 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CAPN3P20807 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CAPN3P20807 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.53□□□□□ -1.84
CAPN3P20807 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.53□□□□□ -1.84
CAPN3P20807 ZNF519P3-201ENST00000557158 1032 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.53□□□□□ -1.84
CAPN3P20807 AL158211.1-201ENST00000566763 763 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CAPN3P20807 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.53□□□□□ -1.84
CAPN3P20807 MIR4293-201ENST00000584305 78 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.53□□□□□ -1.84
CAPN3P20807 WISP1-OT1-201ENST00000602893 642 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 U3.45-201ENST00000607547 219 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 AC107294.3-201ENST00000609211 526 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.53□□□□□ -1.84
CAPN3P20807 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.53□□□□□ -1.84
CAPN3P20807 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
CAPN3P20807 AP004289.2-201ENST00000444413 1457 ntBASIC3.53□□□□□ -1.84
CAPN3P20807 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CAPN3P20807 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CAPN3P20807 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CAPN3P20807 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CAPN3P20807 AC099654.7-201ENST00000635788 2127 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CAPN3P20807 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.52□□□□□ -1.85
CAPN3P20807 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.52□□□□□ -1.85
CAPN3P20807 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.52□□□□□ -1.85
CAPN3P20807 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CAPN3P20807 MIR183-201ENST00000384958 110 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 AL136116.1-201ENST00000403591 381 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 Y_RNA.608-201ENST00000410647 95 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.52□□□□□ -1.85
CAPN3P20807 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.52□□□□□ -1.85
CAPN3P20807 MTND2P18-201ENST00000419962 1030 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 AC099548.1-201ENST00000421443 426 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 AC006989.1-201ENST00000427212 131 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.52□□□□□ -1.85
CAPN3P20807 KATNBL1P6-201ENST00000453433 915 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 SSXP1-201ENST00000453640 473 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.52□□□□□ -1.85
CAPN3P20807 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.52□□□□□ -1.85
CAPN3P20807 RNU7-23P-201ENST00000459465 62 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.52□□□□□ -1.85
CAPN3P20807 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.52□□□□□ -1.85
CAPN3P20807 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.52□□□□□ -1.85
CAPN3P20807 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.52□□□□□ -1.85
CAPN3P20807 RNU2-10P-201ENST00000516375 211 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.52□□□□□ -1.85
CAPN3P20807 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms