Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 FKBP1BP1-201ENST00000553366 325 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 AC025884.1-201ENST00000556034 378 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 MIR4703-201ENST00000577728 79 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 AC138761.3-201ENST00000579993 334 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 PLCE1P1-201ENST00000622094 305 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 AC138965.3-201ENST00000623875 498 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 AC092608.2-201ENST00000624427 218 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 AC008785.1-201ENST00000624475 456 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 U6.114-201ENST00000636407 96 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 AL157777.2-201ENST00000258070 137 ntBASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 RNU6-188P-201ENST00000364207 107 ntBASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 SNORA75B-201ENST00000384053 137 ntBASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 RPL21P24-201ENST00000413752 448 ntBASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 AL137014.1-201ENST00000420490 1226 ntBASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 snoU13.3-201ENST00000459441 104 ntBASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 AC090602.1-201ENST00000469695 252 ntBASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 HMGB3P17-201ENST00000504195 649 ntBASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 RN7SL176P-201ENST00000580352 264 ntBASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 AC093227.2-201ENST00000589357 285 ntBASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 AC012443.1-201ENST00000605605 231 ntBASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 AC093535.2-201ENST00000624769 2326 ntBASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 MAPK10-304ENST00000641341 3984 ntBASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.12□□□□□ -1.43
CSB-PGBD3P0DP91 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 AC073136.1-201ENST00000449426 2884 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 Y_RNA.80-201ENST00000362996 102 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 RNU6-1109P-201ENST00000391187 107 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 RAC1P6-201ENST00000423911 575 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 OR4C10P-201ENST00000434991 931 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 RPL36AP6-201ENST00000435770 321 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 PARP4P3-201ENST00000510265 317 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 Y_RNA.721-201ENST00000517207 102 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 IGKV3OR22-2-201ENST00000517943 313 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 MTND4P7-201ENST00000523876 130 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 AP000827.1-201ENST00000527814 258 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 AC034105.4-201ENST00000568304 277 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 AC012669.1-201ENST00000603209 283 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 AC137590.2-201ENST00000619709 240 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 AL023881.1-201ENST00000621088 301 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 BDP1P-201ENST00000582658 1990 ntBASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.11□□□□□ -1.43
CSB-PGBD3P0DP91 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 RNU6-1249P-201ENST00000363237 111 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 RNU6-1284P-201ENST00000363701 100 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 Y_RNA.396-201ENST00000383949 103 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 EIF4A1P3-201ENST00000411521 244 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 SNORA84-201ENST00000459229 133 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms