Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.87□□□□□ -2.11
COL4A2P08572 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.87□□□□□ -2.11
COL4A2P08572 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.87□□□□□ -2.11
COL4A2P08572 ZNF705CP-201ENST00000530515 889 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 OR4P1P-201ENST00000530808 1136 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL4A2P08572 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.87□□□□□ -2.11
COL4A2P08572 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.87□□□□□ -2.11
COL4A2P08572 XIAPP1-201ENST00000603162 600 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AC009314.1-201ENST00000603871 304 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AC009220.3-201ENST00000604318 586 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AP003973.1-201ENST00000604639 691 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AL590282.1-201ENST00000610379 1136 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AC010678.1-201ENST00000614118 713 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AL355810.1-201ENST00000614629 552 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AC107308.1-201ENST00000615897 301 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AC006963.1-201ENST00000624003 1052 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
COL4A2P08572 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.87□□□□□ -2.11
COL4A2P08572 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.87□□□□□ -2.11
COL4A2P08572 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL4A2P08572 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
COL4A2P08572 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
COL4A2P08572 RNU6-1066P-201ENST00000363573 105 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 DEFB109C-201ENST00000382575 264 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 DEFB109B-201ENST00000382656 264 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 RNA5SP56-201ENST00000410277 118 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A2P08572 RPS6P14-201ENST00000425165 719 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.86□□□□□ -2.11
COL4A2P08572 HMGB1P31-201ENST00000437242 427 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 RPL17P49-201ENST00000443728 411 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AC004022.1-201ENST00000447766 1066 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.86□□□□□ -2.11
COL4A2P08572 PTGES3P5-201ENST00000455109 434 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AC109471.1-201ENST00000511631 612 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 RNU6-202P-201ENST00000515998 96 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A2P08572 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL4A2P08572 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A2P08572 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A2P08572 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A2P08572 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.86□□□□□ -2.11
COL4A2P08572 AC133794.1-201ENST00000602731 914 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AC013468.1-201ENST00000608680 598 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AC092954.1-201ENST00000609121 445 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AC009570.1-201ENST00000609599 745 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 MIR8084-201ENST00000614105 89 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AC090116.1-201ENST00000615679 446 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AC130650.2-201ENST00000618736 2403 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.86□□□□□ -2.11
COL4A2P08572 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL4A2P08572 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL4A2P08572 Y_RNA.493-201ENST00000384422 102 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 MTCO2P31-201ENST00000402702 684 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 EIF1AXP1-201ENST00000419267 435 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 RPL31P54-201ENST00000429803 370 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A2P08572 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A2P08572 AC241584.1-201ENST00000438469 1241 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A2P08572 NAP1L1P3-201ENST00000462291 880 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL4A2P08572 MLLT10P2-201ENST00000506434 249 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.86□□□□□ -2.11
COL4A2P08572 AP000790.1-201ENST00000528891 737 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A2P08572 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.86□□□□□ -2.11
COL4A2P08572 RPS3AP23-202ENST00000574601 686 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 AC016877.3-201ENST00000606778 504 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.86□□□□□ -2.11
COL4A2P08572 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL4A2P08572 AL353748.2-201ENST00000622148 471 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 MTND2P41-201ENST00000637599 773 ntBASIC1.86□□□□□ -2.11
COL4A2P08572 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC1.85□□□□□ -2.11
COL4A2P08572 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
COL4A2P08572 MIRLET7G-201ENST00000362280 84 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 RNA5SP258-201ENST00000362750 119 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 SET-203ENST00000372688 801 ntTSL 2 BASIC1.85□□□□□ -2.11
COL4A2P08572 OR1L1-202ENST00000373686 1083 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
COL4A2P08572 SNORA51.11-201ENST00000384442 131 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
COL4A2P08572 RNU2-20P-201ENST00000410425 191 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 HMGB3P2-201ENST00000411913 584 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.85□□□□□ -2.11
COL4A2P08572 SFR1P2-201ENST00000421841 730 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 AL590762.3-201ENST00000436372 640 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.85□□□□□ -2.11
COL4A2P08572 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.85□□□□□ -2.11
COL4A2P08572 NDUFA5P7-201ENST00000452914 242 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 HMGN2P16-201ENST00000456802 261 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 MTCO3P35-201ENST00000485582 781 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.85□□□□□ -2.11
COL4A2P08572 AC006390.1-201ENST00000508068 283 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 AC107393.1-201ENST00000512403 346 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms