Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL356968.1-201ENST00000416622 474 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 HSPE1P1-201ENST00000421494 318 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.23□□□□□ -1.89
CLPTM1O96005 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.23□□□□□ -1.89
CLPTM1O96005 AC007389.2-201ENST00000434630 306 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.23□□□□□ -1.89
CLPTM1O96005 HMGB3P11-201ENST00000440127 604 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 NOTCH2P1-201ENST00000443481 624 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 MTND6P13-201ENST00000443510 523 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.23□□□□□ -1.89
CLPTM1O96005 NANOGNBP1-201ENST00000448444 480 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLPTM1O96005 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.23□□□□□ -1.89
CLPTM1O96005 AC093392.2-201ENST00000450682 337 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 MTCYBP1-201ENST00000454315 1119 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.23□□□□□ -1.89
CLPTM1O96005 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.23□□□□□ -1.89
CLPTM1O96005 HMGB1P25-201ENST00000468402 607 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 AC021382.1-201ENST00000483523 359 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.23□□□□□ -1.89
CLPTM1O96005 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.23□□□□□ -1.89
CLPTM1O96005 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.23□□□□□ -1.89
CLPTM1O96005 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.23□□□□□ -1.89
CLPTM1O96005 RN7SKP298-201ENST00000515950 94 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 RNA5SP468-201ENST00000516782 93 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 SNORA18.6-201ENST00000516792 115 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 RNU6-711P-201ENST00000517255 106 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 AC022616.6-201ENST00000520479 119 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 AC007991.1-201ENST00000522680 631 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 AP004371.1-201ENST00000525240 214 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 AP003497.1-201ENST00000528472 562 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.23□□□□□ -1.89
CLPTM1O96005 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.23□□□□□ -1.89
CLPTM1O96005 AC123904.2-201ENST00000548059 300 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 MIR1254-2-201ENST00000579553 63 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 AL391813.2-201ENST00000609113 322 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 AC108747.1-201ENST00000609508 535 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 OR10AB1P-201ENST00000609613 938 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 AC087241.4-201ENST00000612441 480 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 AC013476.2-201ENST00000614456 459 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 AC108479.2-201ENST00000617314 601 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CLPTM1O96005 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLPTM1O96005 MTND5P19-201ENST00000424872 1794 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.22□□□□□ -1.89
CLPTM1O96005 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLPTM1O96005 AC093831.2-201ENST00000624393 3427 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 Y_RNA.516-201ENST00000384541 124 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 RPL7P60-201ENST00000397636 735 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 FCF1P10-201ENST00000407590 479 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 RNU6ATAC-201ENST00000408749 126 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 RNU2-47P-201ENST00000410649 186 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 RN7SKP123-201ENST00000410732 291 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 SPA17P1-201ENST00000416656 452 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 USP9YP28-201ENST00000435142 589 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.22□□□□□ -1.89
CLPTM1O96005 AC007967.1-201ENST00000455422 1159 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.22□□□□□ -1.89
CLPTM1O96005 SNORA84-201ENST00000459229 133 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 snoU13.3-201ENST00000459441 104 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 AL133162.1-201ENST00000463228 453 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 RN7SL594P-201ENST00000470590 287 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.22□□□□□ -1.89
CLPTM1O96005 RPL37P25-201ENST00000507308 276 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 AC017037.2-201ENST00000513850 890 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 AP003467.2-201ENST00000520175 319 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLPTM1O96005 AP003181.2-201ENST00000528941 181 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.22□□□□□ -1.89
CLPTM1O96005 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.22□□□□□ -1.89
CLPTM1O96005 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.22□□□□□ -1.89
CLPTM1O96005 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.22□□□□□ -1.89
CLPTM1O96005 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.22□□□□□ -1.89
CLPTM1O96005 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.22□□□□□ -1.89
CLPTM1O96005 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.22□□□□□ -1.89
CLPTM1O96005 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
CLPTM1O96005 AC090578.1-201ENST00000604955 591 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.22□□□□□ -1.89
CLPTM1O96005 AP001506.1-201ENST00000615444 211 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.22□□□□□ -1.89
CLPTM1O96005 CR392039.5-201ENST00000623201 510 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 AC110994.2-201ENST00000635481 492 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.22□□□□□ -1.89
CLPTM1O96005 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLPTM1O96005 MTND5P33-201ENST00000571250 1450 ntBASIC3.22□□□□□ -1.89
CLPTM1O96005 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLPTM1O96005 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLPTM1O96005 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLPTM1O96005 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLPTM1O96005 RNY4P24-201ENST00000362735 96 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 U3.6-201ENST00000363622 211 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 RNU6-1042P-201ENST00000384204 107 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CLPTM1O96005 SNORD115.1-201ENST00000391109 76 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 RN7SKP58-201ENST00000411010 305 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.21□□□□□ -1.9
CLPTM1O96005 AC006548.1-201ENST00000427470 102 ntBASIC3.21□□□□□ -1.9
CLPTM1O96005 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.21□□□□□ -1.9
CLPTM1O96005 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms