Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA3O60609 AL591848.4-201ENST00000567832 3472 ntBASIC5.52□□□□□ -1.53
GFRA3O60609 AL138820.1-201ENST00000617901 5305 ntBASIC5.52□□□□□ -1.53
GFRA3O60609 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA3O60609 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA3O60609 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
GFRA3O60609 RNA5SP211-201ENST00000365516 117 ntBASIC5.52□□□□□ -1.53
GFRA3O60609 RNU6-36P-201ENST00000384172 107 ntBASIC5.52□□□□□ -1.53
GFRA3O60609 RNU6-768P-201ENST00000384683 107 ntBASIC5.52□□□□□ -1.53
GFRA3O60609 RAB9AP3-201ENST00000412737 573 ntBASIC5.52□□□□□ -1.53
GFRA3O60609 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.52□□□□□ -1.53
GFRA3O60609 RAB9AP1-201ENST00000449393 573 ntBASIC5.52□□□□□ -1.53
GFRA3O60609 AC008481.1-201ENST00000463278 396 ntBASIC5.52□□□□□ -1.53
GFRA3O60609 RPS29P27-201ENST00000463711 170 ntBASIC5.52□□□□□ -1.53
GFRA3O60609 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.52□□□□□ -1.53
GFRA3O60609 RN7SKP67-201ENST00000515905 235 ntBASIC5.52□□□□□ -1.53
GFRA3O60609 RNU6-941P-201ENST00000516346 108 ntBASIC5.52□□□□□ -1.53
GFRA3O60609 AP003730.1-201ENST00000524605 285 ntBASIC5.52□□□□□ -1.53
GFRA3O60609 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.52□□□□□ -1.53
GFRA3O60609 AC011447.4-201ENST00000587562 111 ntBASIC5.52□□□□□ -1.53
GFRA3O60609 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.52□□□□□ -1.53
GFRA3O60609 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
GFRA3O60609 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC5.52□□□□□ -1.53
GFRA3O60609 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.52□□□□□ -1.53
GFRA3O60609 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.52□□□□□ -1.53
GFRA3O60609 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA3O60609 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA3O60609 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA3O60609 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.52□□□□□ -1.53
GFRA3O60609 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA3O60609 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA3O60609 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA3O60609 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA3O60609 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA3O60609 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA3O60609 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA3O60609 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.51□□□□□ -1.53
GFRA3O60609 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA3O60609 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.51□□□□□ -1.53
GFRA3O60609 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA3O60609 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
GFRA3O60609 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA3O60609 MIR133B-201ENST00000362210 119 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 RNU6-766P-201ENST00000362478 107 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 RNU6-942P-201ENST00000363002 107 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 Y_RNA.328-201ENST00000365208 113 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 RNU6-395P-201ENST00000365662 106 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA3O60609 SNORA51.10-201ENST00000384418 136 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 RNU6-1179P-201ENST00000384667 107 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 MIR548A1-201ENST00000385041 97 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.51□□□□□ -1.53
GFRA3O60609 MTHFD2P2-201ENST00000407725 247 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 MIR1255A-201ENST00000408338 113 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 AL096701.2-201ENST00000416920 238 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA3O60609 AC004975.1-201ENST00000428733 208 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.51□□□□□ -1.53
GFRA3O60609 HSPE1P13-201ENST00000451143 297 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 RBMY2TP-201ENST00000451162 947 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 RPS4XP13-201ENST00000483219 789 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 AL035690.1-201ENST00000490892 383 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 AC005726.1-201ENST00000494679 427 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 RNU6-352P-201ENST00000516908 107 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.51□□□□□ -1.53
GFRA3O60609 AC021269.2-201ENST00000532318 330 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA3O60609 AC133485.4-201ENST00000561835 220 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 AC138907.4-201ENST00000570107 226 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 Y_RNA.757-201ENST00000578934 114 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 MIR3145-201ENST00000580727 82 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA3O60609 AL121890.5-201ENST00000620848 304 ntBASIC5.51□□□□□ -1.53
GFRA3O60609 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.51□□□□□ -1.53
GFRA3O60609 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA3O60609 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA3O60609 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA3O60609 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA3O60609 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.51□□□□□ -1.53
GFRA3O60609 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
GFRA3O60609 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 NAMPTP1-201ENST00000440465 2514 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 AC005224.3-201ENST00000584683 2140 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.5□□□□□ -1.53
GFRA3O60609 OLMALINC-203ENST00000641087 3779 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.5□□□□□ -1.53
GFRA3O60609 AC079741.1-201ENST00000321498 212 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms