Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
GRIN3BO60391 RPL21P17-201ENST00000397467 475 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 RNU2-36P-201ENST00000410361 191 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 RNA5SP107-201ENST00000411358 122 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 EIF4HP2-201ENST00000424380 563 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 CKS1BP6-201ENST00000424932 240 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 AL691449.1-201ENST00000426570 421 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.2□□□□□ -1.58
GRIN3BO60391 GPM6BP2-201ENST00000432046 144 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.2□□□□□ -1.58
GRIN3BO60391 GTF2IP13-201ENST00000438487 386 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 MRPL48P1-201ENST00000445390 636 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 GPM6BP1-201ENST00000446387 144 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 SNRPFP3-201ENST00000457792 225 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.2□□□□□ -1.58
GRIN3BO60391 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.2□□□□□ -1.58
GRIN3BO60391 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.2□□□□□ -1.58
GRIN3BO60391 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.2□□□□□ -1.58
GRIN3BO60391 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
GRIN3BO60391 RNA5SP249-201ENST00000516127 99 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 RNU6-864P-201ENST00000516256 108 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 IGKV2D-36-201ENST00000518643 226 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 DEFB109D-201ENST00000529497 240 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.2□□□□□ -1.58
GRIN3BO60391 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.2□□□□□ -1.58
GRIN3BO60391 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.2□□□□□ -1.58
GRIN3BO60391 AC024619.4-201ENST00000580924 316 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.2□□□□□ -1.58
GRIN3BO60391 AC006363.1-201ENST00000603806 463 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 AC090971.5-201ENST00000621102 293 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.2□□□□□ -1.58
GRIN3BO60391 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.2□□□□□ -1.58
GRIN3BO60391 MIR4496-201ENST00000635896 61 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 U6.114-201ENST00000636407 96 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GRIN3BO60391 AC139769.1-204ENST00000472297 1931 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 AC121333.1-201ENST00000567488 2709 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
GRIN3BO60391 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.2□□□□□ -1.58
GRIN3BO60391 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
GRIN3BO60391 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GRIN3BO60391 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
GRIN3BO60391 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.19□□□□□ -1.58
GRIN3BO60391 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
GRIN3BO60391 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
GRIN3BO60391 MTND4P14-201ENST00000435799 1354 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GRIN3BO60391 AC090971.4-201ENST00000560291 1800 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GRIN3BO60391 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GRIN3BO60391 Y_RNA.373-201ENST00000365600 103 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.19□□□□□ -1.58
GRIN3BO60391 AC019155.1-201ENST00000382242 574 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 Y_RNA.414-201ENST00000384011 101 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 RNU6-1013P-201ENST00000384180 107 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 MIR30B-201ENST00000384850 88 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GRIN3BO60391 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.19□□□□□ -1.58
GRIN3BO60391 AL109755.1-201ENST00000401791 649 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.19□□□□□ -1.58
GRIN3BO60391 SYF2P2-201ENST00000417620 583 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.19□□□□□ -1.58
GRIN3BO60391 RPL7L1P10-201ENST00000427790 463 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.19□□□□□ -1.58
GRIN3BO60391 RPS20P1-201ENST00000434853 354 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 RPL23AP46-201ENST00000438548 490 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 AL031584.1-201ENST00000447169 754 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 AC010655.1-201ENST00000449336 292 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.19□□□□□ -1.58
GRIN3BO60391 RNU7-66P-201ENST00000459469 62 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 RNU6-1208P-201ENST00000459588 107 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 AC135721.1-201ENST00000497954 479 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 AC026782.1-201ENST00000512952 449 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 RNU6-1170P-201ENST00000515974 106 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 SNORA25.17-201ENST00000517184 124 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.19□□□□□ -1.58
GRIN3BO60391 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.19□□□□□ -1.58
GRIN3BO60391 AC100870.1-201ENST00000522035 505 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.19□□□□□ -1.58
GRIN3BO60391 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GRIN3BO60391 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.19□□□□□ -1.58
GRIN3BO60391 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GRIN3BO60391 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.19□□□□□ -1.58
GRIN3BO60391 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.19□□□□□ -1.58
GRIN3BO60391 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.19□□□□□ -1.58
GRIN3BO60391 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.19□□□□□ -1.58
GRIN3BO60391 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.19□□□□□ -1.58
GRIN3BO60391 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.19□□□□□ -1.58
GRIN3BO60391 AC012443.1-201ENST00000605605 231 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 AL442067.1-201ENST00000613261 223 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 uc_338.34-201ENST00000617467 174 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
GRIN3BO60391 MIR6852-201ENST00000621699 66 ntBASIC5.19□□□□□ -1.58
GRIN3BO60391 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.19□□□□□ -1.58
GRIN3BO60391 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GRIN3BO60391 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.19□□□□□ -1.58
GRIN3BO60391 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GRIN3BO60391 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GRIN3BO60391 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
GRIN3BO60391 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms