Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 MIR4658-201ENST00000584344 65 ntBASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 MIR4999-201ENST00000585029 91 ntBASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 AC073544.2-201ENST00000601155 540 ntBASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 PRELID3BP8-201ENST00000604148 295 ntBASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 RNU1-30P-201ENST00000606575 163 ntBASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 AC108747.1-201ENST00000609508 535 ntBASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 U1.23-201ENST00000610293 146 ntBASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 RNU1-68P-201ENST00000615382 146 ntBASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 U1.39-201ENST00000621562 146 ntBASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 AC079416.3-201ENST00000624479 549 ntBASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 RLIMP1-201ENST00000339626 1680 ntBASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HMGB1P1B2RPK0 AC080128.1-201ENST00000474389 1917 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 AC032011.1-201ENST00000611703 1549 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 VTRNA1-1-201ENST00000363120 99 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 RNY3P13-201ENST00000365542 102 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 RNU6-809P-201ENST00000384461 107 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 MIR218-1-201ENST00000384999 110 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 AC092642.1-201ENST00000392417 425 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 RPL21P3-201ENST00000395517 478 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 ELOCP17-201ENST00000414751 326 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 SDCBPP3-201ENST00000419629 891 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 RN7SL283P-201ENST00000489055 303 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 AC026979.1-201ENST00000492525 396 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 RNU5F-8P-201ENST00000515941 111 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 SNORA31.6-201ENST00000516241 130 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 CDH12P4-201ENST00000517835 295 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 CDH12P3-201ENST00000517935 295 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 CDH12P1-201ENST00000518435 295 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 AP006587.4-201ENST00000526053 529 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 MIR3167-201ENST00000579623 85 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 MIR5194-201ENST00000582634 120 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 AL356280.1-201ENST00000603614 379 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 DUSP12P1-201ENST00000612874 516 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 AL589994.2-201ENST00000621124 579 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 MIR6500-201ENST00000622700 86 ntBASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGB1P1B2RPK0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 RNU6-1284P-201ENST00000363701 100 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 RNU6-398P-201ENST00000384143 109 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 AC093106.2-201ENST00000428212 385 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 AC006466.1-201ENST00000438721 289 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 NEFMP1-201ENST00000443423 1006 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 OSTCP8-201ENST00000445117 448 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 NANOGNBP1-201ENST00000448444 480 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 FABP5P15-201ENST00000453566 214 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 RNA5SP217-201ENST00000515959 91 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 SNORA31.18-201ENST00000517043 134 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 AC008277.2-201ENST00000605196 797 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 AP000860.1-201ENST00000605250 559 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 PISRT1-201ENST00000626175 531 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 AC092192.1-201ENST00000633154 1018 ntBASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HMGB1P1B2RPK0 AC135776.4-201ENST00000624300 1904 ntBASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 U3.6-201ENST00000363622 211 ntBASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 RNU6-213P-201ENST00000384051 104 ntBASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 U3.26-201ENST00000391236 204 ntBASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 RPS20P2-201ENST00000402520 389 ntBASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 RPL26P27-201ENST00000414397 437 ntBASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 AL591419.1-201ENST00000427423 339 ntBASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 OR2AS1P-201ENST00000427827 319 ntBASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 AC097713.2-201ENST00000430199 356 ntBASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGB1P1B2RPK0 RPS24P13-201ENST00000442520 397 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms