Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 DUXAP10-204ENST00000612052 616 ntBASIC1.66□□□□□ -2.14
TRAV4A0A0B4J268 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV4A0A0B4J268 MIR1264-201ENST00000616374 69 ntBASIC1.66□□□□□ -2.14
TRAV4A0A0B4J268 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV4A0A0B4J268 AC009159.1-201ENST00000618386 642 ntBASIC1.66□□□□□ -2.14
TRAV4A0A0B4J268 AL163051.2-201ENST00000618976 735 ntBASIC1.66□□□□□ -2.14
TRAV4A0A0B4J268 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV4A0A0B4J268 KPNA2P1-201ENST00000458289 1591 ntBASIC1.66□□□□□ -2.14
TRAV4A0A0B4J268 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
TRAV4A0A0B4J268 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV4A0A0B4J268 AL359851.1-201ENST00000569460 4997 ntBASIC1.66□□□□□ -2.14
TRAV4A0A0B4J268 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV4A0A0B4J268 AC007785.2-201ENST00000598627 1916 ntBASIC1.66□□□□□ -2.14
TRAV4A0A0B4J268 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
TRAV4A0A0B4J268 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
TRAV4A0A0B4J268 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 RNU6-525P-201ENST00000363685 104 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 RNU6-619P-201ENST00000365146 108 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 MIR17-201ENST00000385012 84 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AL445529.1-201ENST00000398713 389 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 NDUFB4P4-201ENST00000404822 243 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 ATF1P1-201ENST00000406040 927 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 RNU6-1328P-201ENST00000410938 106 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AL356379.1-201ENST00000414105 126 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 HMGB1P49-201ENST00000418882 569 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 MTND2P6-201ENST00000455337 1030 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 RPL32P14-201ENST00000463196 378 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AC072039.1-201ENST00000477611 581 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 HSPE1P6-201ENST00000479457 291 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AC138853.1-201ENST00000503549 823 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 COX7A2P2-201ENST00000505291 250 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AC124947.2-202ENST00000552735 133 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AL391261.3-201ENST00000557194 520 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 HMGN2P15-201ENST00000585707 270 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AC002984.1-201ENST00000591692 448 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AC026790.2-201ENST00000606282 430 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AL162373.1-201ENST00000620433 407 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AC073592.7-201ENST00000623659 507 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AC068057.2-201ENST00000624047 895 ntBASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV4A0A0B4J268 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 FTLP6-201ENST00000355274 422 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 SNORA16B-201ENST00000364674 135 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 RNA5SP37-201ENST00000365420 130 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 SNORA46.1-201ENST00000391069 153 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 AL591416.1-201ENST00000404015 867 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 CYCSP48-201ENST00000417124 323 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 PSMA6P3-201ENST00000428242 164 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 RPS15AP28-201ENST00000435088 386 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 UBE2FP3-201ENST00000436366 524 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 MRPS17P3-201ENST00000465453 385 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 RN7SL636P-201ENST00000497504 294 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 SCARNA15.2-201ENST00000516409 127 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 AP001646.1-201ENST00000527936 915 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 AC008127.2-201ENST00000549925 1075 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 AC025165.5-201ENST00000602802 578 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 AC080013.4-201ENST00000607624 649 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 AC008498.1-201ENST00000613012 531 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 MIR6766-201ENST00000622641 72 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 AC007998.5-201ENST00000622938 237 ntBASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV4A0A0B4J268 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TRAV4A0A0B4J268 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms