Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AL590383.1-201ENST00000428602 75 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 HMGB1P31-201ENST00000437242 427 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AC041039.1-201ENST00000485656 536 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU6-677P-201ENST00000516914 101 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 ATP5F1P5-201ENST00000526403 760 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AC135001.1-201ENST00000544546 283 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AC079587.1-201ENST00000603846 277 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AC024940.5-201ENST00000622889 474 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AC140479.6-201ENST00000633535 357 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 MIR3662-201ENST00000637030 95 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AC004972.1-201ENST00000623934 2209 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 API5P2-201ENST00000397055 1498 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AC103710.2-202ENST00000641454 2853 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 MIR383-201ENST00000362257 73 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU6-50P-201ENST00000362356 103 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 Y_RNA.38-201ENST00000362617 102 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 SNORA24.1-201ENST00000384401 135 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 SNORA37-201ENST00000384504 129 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 MIR513A2-201ENST00000385249 127 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 AL445189.1-201ENST00000405722 338 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 RN7SKP140-201ENST00000411196 284 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 AC068533.1-201ENST00000418542 415 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 TXNP1-201ENST00000441872 371 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 HSFY6P-201ENST00000445573 403 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 AC012671.1-201ENST00000451912 203 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 RPL37P6-201ENST00000460682 294 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 RPS29P25-201ENST00000481709 171 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 AC108078.2-201ENST00000510750 236 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 RNA5SP401-201ENST00000515920 127 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 AF235103.2-201ENST00000525753 346 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 AP006587.4-201ENST00000526053 529 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 RANP3-201ENST00000530970 276 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 OR5D17P-201ENST00000531492 978 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 AC008945.2-201ENST00000606056 604 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 MIR6891-201ENST00000618788 93 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 DUXAP9-208ENST00000622815 614 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 AP003122.6-201ENST00000623831 495 ntBASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA3Q9Y5H0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.21□□□□□ -1.73
PCDHGA3Q9Y5H0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHGA3Q9Y5H0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AL139276.1-201ENST00000311910 1001 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AC067945.1-201ENST00000342609 618 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 MIR331-201ENST00000362302 94 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 RNU6-600P-201ENST00000362524 99 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 RNU6-61P-201ENST00000365528 109 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 SMIM11P1-201ENST00000369586 178 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 RNU1-13P-201ENST00000384499 162 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AL354719.1-201ENST00000406535 843 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 RNA5SP317-201ENST00000410176 116 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 RNA5SP311-201ENST00000411290 116 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AC114491.1-201ENST00000416095 246 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AL451054.2-201ENST00000420896 202 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 RPL21P91-201ENST00000429231 479 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 BTF3P10-201ENST00000433415 495 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 OR4C10P-201ENST00000434991 931 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms