Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AP002963.1-201ENST00000530590 184 ntBASIC3.41□□□□□ -1.86
YIPF1Q9Y548 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
YIPF1Q9Y548 AC123904.2-201ENST00000548059 300 ntBASIC3.41□□□□□ -1.86
YIPF1Q9Y548 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.41□□□□□ -1.86
YIPF1Q9Y548 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.41□□□□□ -1.86
YIPF1Q9Y548 MIR2682-201ENST00000580305 110 ntBASIC3.41□□□□□ -1.86
YIPF1Q9Y548 AC009977.1-201ENST00000586015 570 ntBASIC3.41□□□□□ -1.86
YIPF1Q9Y548 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.41□□□□□ -1.86
YIPF1Q9Y548 AL158211.4-201ENST00000606988 584 ntBASIC3.41□□□□□ -1.86
YIPF1Q9Y548 AC103710.3-201ENST00000608157 948 ntBASIC3.41□□□□□ -1.86
YIPF1Q9Y548 AL391813.2-201ENST00000609113 322 ntBASIC3.41□□□□□ -1.86
YIPF1Q9Y548 AP000254.1-201ENST00000609934 520 ntBASIC3.41□□□□□ -1.86
YIPF1Q9Y548 AL355472.4-201ENST00000610233 626 ntBASIC3.41□□□□□ -1.86
YIPF1Q9Y548 TUG1_1.1-201ENST00000610654 145 ntBASIC3.41□□□□□ -1.86
YIPF1Q9Y548 RNVU1-4-201ENST00000612985 164 ntBASIC3.41□□□□□ -1.86
YIPF1Q9Y548 AC112204.3-201ENST00000623822 332 ntBASIC3.41□□□□□ -1.86
YIPF1Q9Y548 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.41□□□□□ -1.86
YIPF1Q9Y548 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
YIPF1Q9Y548 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
YIPF1Q9Y548 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
YIPF1Q9Y548 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
YIPF1Q9Y548 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.41□□□□□ -1.86
YIPF1Q9Y548 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.4□□□□□ -1.86
YIPF1Q9Y548 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
YIPF1Q9Y548 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 RNU6-623P-201ENST00000363143 105 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 RNU6-1074P-201ENST00000383995 104 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 SNORD115.1-201ENST00000391109 76 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 Z98941.1-201ENST00000407764 100 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AC007899.1-201ENST00000412776 775 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 CDK8P2-201ENST00000415020 547 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 MTCO3P12-201ENST00000416718 547 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AL137014.1-201ENST00000420490 1226 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 BX890604.2-201ENST00000427883 474 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 NPM1P49-201ENST00000448027 714 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 CFTRP1-201ENST00000456646 183 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AC055855.1-201ENST00000489563 579 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 ARL2BPP4-201ENST00000506854 471 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AP002453.2-201ENST00000533503 320 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AC018630.1-201ENST00000541376 925 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AL157700.1-201ENST00000561973 1432 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AL157394.1-201ENST00000562983 1224 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AC135507.2-201ENST00000612443 309 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 HULC.1-201ENST00000612720 240 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AC008250.2-201ENST00000615261 205 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AC009159.1-201ENST00000618386 642 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 AC110801.1-201ENST00000623590 212 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 RPS4XP5-202ENST00000449995 1334 ntBASIC3.4□□□□□ -1.87
YIPF1Q9Y548 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
YIPF1Q9Y548 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
YIPF1Q9Y548 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
YIPF1Q9Y548 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
YIPF1Q9Y548 MIR422A-201ENST00000362286 90 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 RNU6-1078P-201ENST00000364522 103 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 OR5H15-201ENST00000383696 930 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 RNU6-348P-201ENST00000384386 107 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 Y_RNA.559-201ENST00000384686 107 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 SNORD116-4-201ENST00000384733 96 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
YIPF1Q9Y548 UBA52P6-201ENST00000399822 382 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AC099677.1-201ENST00000420575 175 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.39□□□□□ -1.87
YIPF1Q9Y548 RPL23AP69-201ENST00000431134 458 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 PGBD4P3-201ENST00000440731 581 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.39□□□□□ -1.87
YIPF1Q9Y548 RPL17P49-201ENST00000443728 411 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 RAC1P7-201ENST00000445367 377 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AL033528.1-201ENST00000453780 140 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AC234775.1-201ENST00000454247 670 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 SNRPFP4-201ENST00000456366 242 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.39□□□□□ -1.87
YIPF1Q9Y548 SNORD42A-201ENST00000459584 64 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 SNRPGP3-201ENST00000469405 227 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 RPL7P47-201ENST00000497299 556 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 RNU6-798P-201ENST00000516912 103 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 RNU6-201P-201ENST00000517100 61 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AP003181.2-201ENST00000528941 181 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AP000907.2-201ENST00000530827 353 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AP003122.4-201ENST00000530980 758 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 OR5D17P-201ENST00000531492 978 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AL133271.1-201ENST00000538229 291 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 ZNF192P1-203ENST00000565888 810 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms