Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.57□□□□□ -1.52
SHROOM4Q9ULL8 AC034222.1-201ENST00000494052 532 ntBASIC5.57□□□□□ -1.52
SHROOM4Q9ULL8 AC106872.3-201ENST00000495104 446 ntBASIC5.57□□□□□ -1.52
SHROOM4Q9ULL8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM4Q9ULL8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM4Q9ULL8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.57□□□□□ -1.52
SHROOM4Q9ULL8 IGKV3-31-201ENST00000523109 329 ntBASIC5.57□□□□□ -1.52
SHROOM4Q9ULL8 AP001804.3-201ENST00000525146 880 ntBASIC5.57□□□□□ -1.52
SHROOM4Q9ULL8 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM4Q9ULL8 AL031667.3-201ENST00000620124 655 ntBASIC5.57□□□□□ -1.52
SHROOM4Q9ULL8 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM4Q9ULL8 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 AP001148.1-201ENST00000624124 2359 ntBASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 RNU5A-2P-201ENST00000384337 116 ntBASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 MIR1305-201ENST00000408300 86 ntBASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 MTND1P20-201ENST00000430341 950 ntBASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 RABEPKP1-201ENST00000440529 1026 ntBASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 MTCYBP3-201ENST00000445588 1137 ntBASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 RNU6-678P-201ENST00000516832 109 ntBASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 HMGN1P28-201ENST00000521340 364 ntBASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 AP002770.2-201ENST00000543613 532 ntBASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 ZNF321P-202ENST00000550843 495 ntBASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 AC002400.1-201ENST00000569310 726 ntBASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 AC106791.2-201ENST00000604680 391 ntBASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
SHROOM4Q9ULL8 AC092881.1-201ENST00000638218 2733 ntBASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 DEFB108F-201ENST00000344638 222 ntBASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 AC234781.2-201ENST00000426370 994 ntBASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 MTCYBP39-201ENST00000437562 491 ntBASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 AC004801.2-202ENST00000463559 283 ntBASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 AC021382.1-201ENST00000483523 359 ntBASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 AC106872.2-201ENST00000494303 480 ntBASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 RNU6-991P-201ENST00000516168 107 ntBASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 DEFB108D-201ENST00000527787 222 ntBASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 AC068587.4-201ENST00000533893 186 ntBASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 AP001429.1-201ENST00000602568 530 ntBASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 AC004972.1-201ENST00000623934 2209 ntBASIC5.55□□□□□ -1.52
SHROOM4Q9ULL8 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 RNA5SP295-201ENST00000362655 121 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 RNU6-777P-201ENST00000364265 104 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 AL590084.2-201ENST00000401481 382 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 RNA5SP508-201ENST00000411327 119 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 MTND1P21-201ENST00000412991 285 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 AC024082.2-201ENST00000434771 238 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 THAP5P1-201ENST00000439089 262 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 CFTRP1-201ENST00000456646 183 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 ARPC3P2-201ENST00000457786 533 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 AC098862.1-201ENST00000504991 413 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 AC022447.3-201ENST00000506865 495 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 HSPE1P23-201ENST00000509838 286 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 Y_RNA.717-201ENST00000517106 92 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 AC009094.1-201ENST00000564443 426 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 MIR6130-201ENST00000619419 109 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 PCMTD1P7-201ENST00000634506 357 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 AP000526.1-201ENST00000603308 1388 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 AC005832.2-201ENST00000538921 1430 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 AC007256.1-201ENST00000392253 2765 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 ZNF658B-202ENST00000615961 3375 ntBASIC5.54□□□□□ -1.52
SHROOM4Q9ULL8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 SNORD56.3-201ENST00000363507 71 ntBASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 MTND4P13-201ENST00000402078 1023 ntBASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms