Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PHRF1Q9P1Y6 AC093536.2-201ENST00000565257 1406 ntBASIC1.96□□□□□ -2.1
PHRF1Q9P1Y6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PHRF1Q9P1Y6 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PHRF1Q9P1Y6 RNU1-22P-201ENST00000363334 158 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 RFESDP1-201ENST00000422350 461 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 HMGB1P45-201ENST00000435986 653 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 MED6P1-201ENST00000439659 713 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 AC055764.2-201ENST00000610089 670 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 U73479.1-201ENST00000618062 168 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 AC116563.2-201ENST00000624751 535 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 AC116618.1-201ENST00000634617 774 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 RNU2-40P-201ENST00000410833 196 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 AC008427.1-201ENST00000503102 655 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 RN7SKP49-201ENST00000516675 260 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 AL137100.2-201ENST00000555786 315 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 MIR548Y-201ENST00000582739 110 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 AC010615.3-201ENST00000597319 394 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 MIR6515-201ENST00000619843 57 ntBASIC1.95□□□□□ -2.1
PHRF1Q9P1Y6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 MAPK10-266ENST00000641066 6555 ntBASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 AC007395.1-201ENST00000451333 677 ntBASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 AC092991.1-201ENST00000477176 376 ntBASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 AC010625.1-201ENST00000511296 403 ntBASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 AP004607.1-201ENST00000524456 203 ntBASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 MIR5194-201ENST00000582634 120 ntBASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 AC022079.2-201ENST00000619739 566 ntBASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PHRF1Q9P1Y6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 DEFB109C-201ENST00000382575 264 ntBASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 DEFB109B-201ENST00000382656 264 ntBASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 RNU1-101P-201ENST00000391171 127 ntBASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 PRELID3BP11-201ENST00000414230 479 ntBASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 AC092155.2-201ENST00000454675 477 ntBASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 OR4V1P-201ENST00000525394 1140 ntBASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 MIR7973-1-201ENST00000614683 76 ntBASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 STMN1P1-201ENST00000617809 440 ntBASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 MIR4496-201ENST00000635896 61 ntBASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
PHRF1Q9P1Y6 AL157700.1-201ENST00000561973 1432 ntBASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 RNU4-31P-201ENST00000384211 141 ntBASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 MORF4L1P7-201ENST00000426038 703 ntBASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 HMGN2P21-201ENST00000447764 270 ntBASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 RPL12P25-201ENST00000455592 494 ntBASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 AC034222.1-201ENST00000494052 532 ntBASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 RPL30P11-201ENST00000495304 339 ntBASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 AP005435.4-201ENST00000529514 284 ntBASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 ANP32BP3-201ENST00000559213 706 ntBASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 LLPHP1-201ENST00000603571 367 ntBASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 AC080078.3-201ENST00000605407 463 ntBASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.92□□□□□ -2.1
PHRF1Q9P1Y6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 AL031663.1-201ENST00000437445 219 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 AC096571.1-202ENST00000506634 735 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 OR5AQ1P-201ENST00000527596 927 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 AC135279.1-201ENST00000543493 504 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 FAM60CP-201ENST00000591086 664 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 RNU6-342P-201ENST00000384521 104 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 HNRNPDP2-201ENST00000406475 478 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 AL030996.1-201ENST00000411430 235 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 RPL31P2-201ENST00000413849 377 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms