Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 Y_RNA.176-201ENST00000363815 109 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 RNU6-1222P-201ENST00000384615 107 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 RNU6-306P-201ENST00000384617 107 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 RPS4XP7-201ENST00000406274 780 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 AC008267.5-201ENST00000424928 265 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 AL354714.3-201ENST00000447284 493 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 RN7SKP92-201ENST00000517266 244 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 PARP1P2-201ENST00000556806 195 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 AC067852.3-201ENST00000589177 561 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 AL391358.1-201ENST00000605342 190 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 AL442067.1-201ENST00000613261 223 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 AC083809.1-201ENST00000615051 472 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 MIR6130-201ENST00000619419 109 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AC126755.2-208ENST00000327792 462 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AC138969.1-213ENST00000331436 462 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 SNORA23-201ENST00000365128 182 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 RNU6-190P-201ENST00000384154 102 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AC110754.1-201ENST00000399740 601 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 ELOCP18-201ENST00000434209 337 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AC015911.1-201ENST00000495111 156 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 RN7SKP276-201ENST00000516242 268 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 RNU6-390P-201ENST00000516259 103 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AP003385.6-201ENST00000531603 374 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AP002404.1-201ENST00000532005 451 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AP001880.2-201ENST00000538233 448 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 OR8R1P-201ENST00000543943 764 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AC113195.1-201ENST00000579952 141 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 BX005214.3-202ENST00000619809 325 ntBASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VTI1AQ96AJ9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 RNU6-490P-201ENST00000362985 107 ntBASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 Y_RNA.188-201ENST00000363952 111 ntBASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 Y_RNA.455-201ENST00000384230 98 ntBASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 RNU6-14P-201ENST00000384630 106 ntBASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 RNA5SP332-201ENST00000391063 115 ntBASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 RNU4-78P-201ENST00000410940 126 ntBASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 COX6CP13-201ENST00000428703 226 ntBASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 MRPS18BP2-201ENST00000434310 759 ntBASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 NEFMP1-201ENST00000443423 1006 ntBASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 RPS23P7-201ENST00000466210 444 ntBASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 SCARNA16.2-201ENST00000516520 172 ntBASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 RNA5SP384-201ENST00000516615 116 ntBASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 AL450472.3-201ENST00000615578 367 ntBASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 AL450345.1-202ENST00000605741 3881 ntBASIC5.61□□□□□ -1.51
VTI1AQ96AJ9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms