Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 RNU6-238P-201ENST00000363313 106 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 RNU6-306P-201ENST00000384617 107 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AL139039.1-201ENST00000401900 692 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AL592291.1-201ENST00000403830 352 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 PSMA2P3-201ENST00000429685 675 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 USP9YP30-201ENST00000430729 455 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AL591704.1-201ENST00000432574 275 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 RPS20P1-201ENST00000434853 354 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 NOTCH2P1-201ENST00000443481 624 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 CYCSP34-201ENST00000458172 304 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AL591473.1-201ENST00000464297 313 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AC026801.2-201ENST00000515352 425 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 RN7SKP46-201ENST00000515942 234 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 Y_RNA.668-201ENST00000516233 93 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 Y_RNA.689-201ENST00000516589 107 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 RN7SKP82-201ENST00000516786 223 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 SNORD116.3-201ENST00000517176 78 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AC133555.2-201ENST00000550213 292 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AC026371.1-201ENST00000551867 419 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 FKBP1BP1-201ENST00000553366 325 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 MIR3936-201ENST00000584304 110 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AC174048.1-201ENST00000603389 144 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AL161423.1-201ENST00000613700 262 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AL359547.2-201ENST00000615810 418 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AC243312.2-201ENST00000623340 601 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.48□□□□□ -1.69
NUP43Q8NFH3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NUP43Q8NFH3 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 RNU6-379P-201ENST00000363813 104 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 Y_RNA.428-201ENST00000384078 102 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 RNU6-190P-201ENST00000384154 102 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 RNU6-14P-201ENST00000384630 106 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 MIR135A2-201ENST00000384854 100 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 U3.30-201ENST00000391308 210 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 RPS4XP7-201ENST00000406274 780 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AC011933.1-201ENST00000413334 321 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 SAGE2P-201ENST00000420011 2126 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 OR2AM1P-201ENST00000422137 422 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AC008065.1-201ENST00000428525 348 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AC006466.1-201ENST00000438721 289 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AL359672.1-201ENST00000442302 409 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AF213884.1-201ENST00000488102 463 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 OR51K1P-201ENST00000510214 950 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AC008033.2-201ENST00000542626 177 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AC091516.1-201ENST00000549191 703 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 MIR5699-201ENST00000578903 90 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AC022726.1-201ENST00000587475 207 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AC092447.9-201ENST00000603395 144 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 IGHV3-29-201ENST00000604817 344 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AC107871.2-201ENST00000612894 502 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AL596275.2-204ENST00000641628 552 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AL596275.2-206ENST00000641957 626 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 SAMMSON-226ENST00000642089 1582 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms