Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 RNU6-884P-201ENST00000363889 107 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 Y_RNA.245-201ENST00000364493 95 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC89Q8N998 AL359634.1-202ENST00000404721 284 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC89Q8N998 CYCSP19-201ENST00000411715 316 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 BTF3L4P3-201ENST00000418879 476 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 GTF2IP20-201ENST00000431663 360 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 AC073063.1-201ENST00000434352 607 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 AC007389.2-201ENST00000434630 306 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC89Q8N998 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC89Q8N998 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC89Q8N998 RPL26P9-201ENST00000457466 433 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 AC025518.1-201ENST00000479856 347 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 MTND2P14-201ENST00000482139 351 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 SEM1P1-201ENST00000506694 209 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC89Q8N998 RNU1-95P-201ENST00000516357 160 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 RNU1-128P-201ENST00000516704 160 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC89Q8N998 DEFB108A-201ENST00000530110 222 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC89Q8N998 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC89Q8N998 AC128657.1-201ENST00000549459 145 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC89Q8N998 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC89Q8N998 AC009097.3-201ENST00000563557 1018 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 AC010546.1-201ENST00000569391 485 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 MIR4697-201ENST00000582977 78 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC89Q8N998 AL355877.2-201ENST00000603670 358 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC89Q8N998 AL121772.2-201ENST00000614331 297 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 AL356321.1-201ENST00000621360 228 ntBASIC3.45□□□□□ -1.86
CCDC89Q8N998 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC89Q8N998 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CCDC89Q8N998 AC026241.1-201ENST00000517873 2142 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 RNU5A-8P-201ENST00000364102 114 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC091390.1-201ENST00000433904 331 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 SETP8-201ENST00000435341 628 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 CST9LP2-201ENST00000437612 320 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC89Q8N998 UBBP3-201ENST00000445497 241 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC89Q8N998 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC113155.1-201ENST00000511141 769 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC89Q8N998 APOOP4-201ENST00000513530 597 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC89Q8N998 RNU6-64P-201ENST00000517119 105 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 RN7SKP258-201ENST00000517151 304 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC022634.1-201ENST00000520765 532 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC068657.1-201ENST00000520807 306 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 AP003461.1-201ENST00000528866 78 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC89Q8N998 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC89Q8N998 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC89Q8N998 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC89Q8N998 MIR4307-201ENST00000582802 84 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC89Q8N998 OR10AB1P-201ENST00000609613 938 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC068831.8-201ENST00000620171 435 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 AC007490.1-201ENST00000624321 703 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 AL049781.1-201ENST00000623195 3585 ntBASIC3.44□□□□□ -1.86
CCDC89Q8N998 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC89Q8N998 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC89Q8N998 MTND5P29-201ENST00000458676 1807 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC89Q8N998 SNORA5A-201ENST00000384111 134 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 SNORA57.1-201ENST00000391227 145 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 RPL5P18-201ENST00000406671 891 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 SNORA11B-201ENST00000408175 129 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 RNU6ATAC-201ENST00000408749 126 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 RNA5SP44-201ENST00000410446 133 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC89Q8N998 AC098614.2-201ENST00000426040 255 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC89Q8N998 ATP5JP1-201ENST00000431631 322 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC89Q8N998 SNRPEP9-201ENST00000436794 238 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC89Q8N998 RPL37P6-201ENST00000460682 294 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 RPL27AP5-201ENST00000469428 449 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 RPL36AP51-201ENST00000487216 318 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 RNA5SP217-201ENST00000515959 91 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 RNA5SP380-201ENST00000517190 98 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 DUXAP2-201ENST00000519198 589 ntBASIC3.43□□□□□ -1.86
CCDC89Q8N998 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC89Q8N998 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC89Q8N998 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC89Q8N998 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CCDC89Q8N998 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.43□□□□□ -1.86
CCDC89Q8N998 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC89Q8N998 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC89Q8N998 AP001004.1-201ENST00000582468 324 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms