Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AL450326.2-201ENST00000421913 1962 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.33-201ENST00000362591 102 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.275-201ENST00000364726 110 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 RNU6-923P-201ENST00000364753 107 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.286-201ENST00000364813 102 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 RNU6-76P-201ENST00000384060 104 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 RNU1-136P-201ENST00000384181 164 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 MIR301A-201ENST00000385261 86 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 RPS20P1-201ENST00000434853 354 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 AC108161.1-201ENST00000461060 402 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 RPS26P21-201ENST00000475397 348 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 RPS17P15-201ENST00000475609 349 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 RN7SL570P-201ENST00000484405 292 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 AK3P2-201ENST00000507976 429 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 RNU6-1219P-201ENST00000516143 112 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 RNA5SP271-201ENST00000516700 88 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 RNU6-143P-201ENST00000516942 93 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 AL596275.2-206ENST00000641957 626 ntBASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC116Q8IYX3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 RNU6-178P-201ENST00000384631 104 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 RNU6-1168P-201ENST00000390831 104 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 MIR1250-201ENST00000408098 113 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 AP006222.1-205ENST00000450734 457 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 AC023141.9-201ENST00000458734 412 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 RPS29P27-201ENST00000463711 170 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 RPL23AP45-201ENST00000476406 468 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 AC137627.1-201ENST00000545761 289 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 SRGNP1-201ENST00000603392 451 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 AC090607.5-201ENST00000615692 224 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 MIR4496-201ENST00000635896 61 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms