Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 Y_RNA.560-201ENST00000384689 102 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 MTCO1P17-201ENST00000411522 491 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 HMGB3P23-201ENST00000414981 585 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 SSXP9-201ENST00000417503 292 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 MTND2P18-201ENST00000419962 1030 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AC099677.1-201ENST00000420575 175 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 HIGD1AP11-201ENST00000438361 280 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 RABEPKP1-201ENST00000440529 1026 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 OR6K5P-201ENST00000447050 945 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AP000542.1-201ENST00000448473 371 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AC106872.3-201ENST00000495104 446 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AC096751.1-202ENST00000502691 1067 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 MLLT10P2-201ENST00000506434 249 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 SCGB1D5P-201ENST00000515134 247 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 MTND2P38-201ENST00000522536 667 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AC018630.1-201ENST00000541376 925 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 CYCSP39-201ENST00000565821 309 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AP001029.3-201ENST00000588063 596 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AC107214.2-201ENST00000608204 634 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AC107294.3-201ENST00000609211 526 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AL390240.1-201ENST00000612950 384 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AL356266.1-201ENST00000623311 483 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AF246928.1-201ENST00000623768 87 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AC079248.2-201ENST00000623779 326 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AL136164.4-201ENST00000625013 2135 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 SNORA46-201ENST00000384762 135 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 AL591034.1-201ENST00000407447 340 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 RNU4-65P-201ENST00000410473 140 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 RNA5SP274-201ENST00000410484 108 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 YPEL5P1-201ENST00000419731 367 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 RPL17P49-201ENST00000443728 411 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 RPS23P3-201ENST00000470993 430 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 RPF2P2-201ENST00000504693 896 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 KLHL2P1-201ENST00000508691 521 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 HIGD1AP13-201ENST00000509878 289 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 AC091826.1-201ENST00000514065 313 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 AC034268.2-201ENST00000571784 482 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 CLIC4P2-201ENST00000601934 717 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 AC025811.1-201ENST00000604312 472 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 TUG1_1.1-201ENST00000610654 145 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 AL603755.1-201ENST00000619504 163 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 AL353748.2-201ENST00000622148 471 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 PCMTD1P7-201ENST00000634506 357 ntBASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC60Q8IWA6 RNU6-553P-201ENST00000364047 96 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 RNU6-7-201ENST00000364784 107 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 SNORA9.2-201ENST00000365361 133 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 RNU6-8-201ENST00000365467 107 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 Y_RNA.510-201ENST00000384511 114 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 MIR135A2-201ENST00000384854 100 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 U3.42-201ENST00000408746 214 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 RN7SKP266-201ENST00000410232 287 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 AC109780.2-201ENST00000413467 845 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 AC245054.2-201ENST00000415639 319 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 AL365203.2-201ENST00000423444 196 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 RSU1P2-202ENST00000437884 485 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 AL162389.1-201ENST00000449233 177 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 AC234775.1-201ENST00000454247 670 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 SNORA59A-201ENST00000459326 152 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 KCTD9P5-201ENST00000504141 1170 ntBASIC3.25□□□□□ -1.89
CCDC60Q8IWA6 POU5F1P7-201ENST00000508759 541 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms