Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AC008758.3-201ENST00000507003 1829 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 GABPAP-201ENST00000419271 1356 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 HSPA8P1-201ENST00000425843 1833 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 MIR133A2-201ENST00000347538 102 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 Y_RNA.199-201ENST00000364014 102 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 RNU6-174P-201ENST00000410406 106 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 RNU6-130P-201ENST00000411112 103 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 RPL23AP38-201ENST00000423801 469 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 PPIAP13-201ENST00000434706 478 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 RPL12P18-201ENST00000437175 325 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 AC005094.1-201ENST00000440420 368 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 RPEP5-201ENST00000441137 268 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 AC104073.1-201ENST00000451988 151 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 NDUFB4P10-201ENST00000452541 359 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 AC010618.1-201ENST00000469924 477 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 RNU6-346P-201ENST00000516288 111 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 IGKV2-23-201ENST00000518729 323 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 AC006023.2-201ENST00000609916 167 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 DLEU2_2.2-201ENST00000615474 90 ntBASIC6.16□□□□□ -1.42
RC3H1Q5TC82 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.16□□□□□ -1.42
RC3H1Q5TC82 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RC3H1Q5TC82 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RC3H1Q5TC82 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.15□□□□□ -1.42
RC3H1Q5TC82 PCAT14-202ENST00000627127 3935 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC6.15□□□□□ -1.42
RC3H1Q5TC82 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RC3H1Q5TC82 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RC3H1Q5TC82 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RC3H1Q5TC82 Y_RNA.48-201ENST00000362710 103 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 RNU6-1266P-201ENST00000362794 105 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 RNY1P16-201ENST00000363063 111 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 RNA5SP515-201ENST00000364570 118 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 RNU6-1117P-201ENST00000384525 104 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 RNA5SP241-201ENST00000391326 114 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC6.15□□□□□ -1.42
RC3H1Q5TC82 COX6CP10-201ENST00000416832 224 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 RPL17P36-201ENST00000420302 549 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 RPL23AP25-201ENST00000430973 463 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 RPL7AP28-201ENST00000464513 571 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.15□□□□□ -1.42
RC3H1Q5TC82 AC022559.1-201ENST00000520905 205 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 AC136777.2-201ENST00000522979 358 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.15□□□□□ -1.42
RC3H1Q5TC82 AL590099.1-201ENST00000615276 138 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 AC000095.2-202ENST00000637415 154 ntBASIC6.15□□□□□ -1.42
RC3H1Q5TC82 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.15□□□□□ -1.43
RC3H1Q5TC82 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RC3H1Q5TC82 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
RC3H1Q5TC82 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 Z95114.1-201ENST00000624264 14574 ntBASIC6.14□□□□□ -1.43
RC3H1Q5TC82 AC093849.1-201ENST00000563631 2209 ntBASIC6.14□□□□□ -1.43
RC3H1Q5TC82 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 MIR411-201ENST00000362239 96 ntBASIC6.14□□□□□ -1.43
RC3H1Q5TC82 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 RN7SKP27-201ENST00000410684 333 ntBASIC6.14□□□□□ -1.43
RC3H1Q5TC82 RNU2-51P-201ENST00000410708 197 ntBASIC6.14□□□□□ -1.43
RC3H1Q5TC82 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 RPL35AP22-201ENST00000436855 335 ntBASIC6.14□□□□□ -1.43
RC3H1Q5TC82 AC074198.2-201ENST00000508153 258 ntBASIC6.14□□□□□ -1.43
RC3H1Q5TC82 AC093840.1-201ENST00000511599 336 ntBASIC6.14□□□□□ -1.43
RC3H1Q5TC82 RNU1-6P-201ENST00000516290 144 ntBASIC6.14□□□□□ -1.43
RC3H1Q5TC82 CBX3P8-201ENST00000532412 525 ntBASIC6.14□□□□□ -1.43
RC3H1Q5TC82 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 AC009852.2-201ENST00000567898 485 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms