Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC245389.1-201ENST00000605141 529 ntBASIC3.36□□□□□ -1.87
EFNB3Q15768 AC012443.1-201ENST00000605605 231 ntBASIC3.36□□□□□ -1.87
EFNB3Q15768 SNHG22-203ENST00000617833 660 ntBASIC3.36□□□□□ -1.87
EFNB3Q15768 AL360181.4-201ENST00000621752 134 ntBASIC3.36□□□□□ -1.87
EFNB3Q15768 AC005609.4-201ENST00000625071 447 ntBASIC3.36□□□□□ -1.87
EFNB3Q15768 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
EFNB3Q15768 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB3Q15768 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB3Q15768 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB3Q15768 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB3Q15768 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB3Q15768 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB3Q15768 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.36□□□□□ -1.87
EFNB3Q15768 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
EFNB3Q15768 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB3Q15768 AP001148.1-201ENST00000624124 2359 ntBASIC3.36□□□□□ -1.87
EFNB3Q15768 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB3Q15768 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.35□□□□□ -1.87
EFNB3Q15768 OTUD4P1-201ENST00000237841 3067 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AC009812.4-201ENST00000569134 1805 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AP001350.1-201ENST00000601906 1524 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.35□□□□□ -1.87
EFNB3Q15768 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB3Q15768 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB3Q15768 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.35□□□□□ -1.87
EFNB3Q15768 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB3Q15768 RNU6-1120P-201ENST00000362988 108 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 RNU6-1085P-201ENST00000363576 107 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 SNORA23-201ENST00000365128 182 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 RNU4-12P-201ENST00000365233 139 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB3Q15768 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
EFNB3Q15768 RNU1-39P-201ENST00000383897 165 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 RNU6-76P-201ENST00000384060 104 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 MIR558-201ENST00000384920 94 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 PTMAP5-201ENST00000393073 333 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AL136372.1-201ENST00000403060 228 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 BTF3P7-201ENST00000407097 488 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 SNORA3.3-201ENST00000408712 125 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AMD1P2-201ENST00000412936 992 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 TOMM22P1-201ENST00000418578 312 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB3Q15768 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.35□□□□□ -1.87
EFNB3Q15768 DUTP6-201ENST00000425573 462 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 MRPS10P2-201ENST00000431226 381 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.35□□□□□ -1.87
EFNB3Q15768 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.35□□□□□ -1.87
EFNB3Q15768 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.35□□□□□ -1.87
EFNB3Q15768 AC006480.1-201ENST00000449887 378 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.35□□□□□ -1.87
EFNB3Q15768 HMGB3P22-202ENST00000451823 572 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.35□□□□□ -1.87
EFNB3Q15768 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.35□□□□□ -1.87
EFNB3Q15768 SNORD97-201ENST00000459187 142 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 RPL21P104-201ENST00000464143 478 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 RN7SL542P-201ENST00000467147 294 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.35□□□□□ -1.87
EFNB3Q15768 PPIAP15-201ENST00000479662 484 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.35□□□□□ -1.87
EFNB3Q15768 RPL31P13-201ENST00000484151 370 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 RN7SL323P-201ENST00000494712 295 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.35□□□□□ -1.87
EFNB3Q15768 AC109927.2-201ENST00000506416 303 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 ARL4AP2-201ENST00000507378 601 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.35□□□□□ -1.87
EFNB3Q15768 RNU6-718P-201ENST00000516166 105 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.35□□□□□ -1.87
EFNB3Q15768 FAM60DP-201ENST00000524174 632 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.35□□□□□ -1.87
EFNB3Q15768 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.35□□□□□ -1.87
EFNB3Q15768 FAM60BP-201ENST00000578364 658 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.35□□□□□ -1.87
EFNB3Q15768 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.35□□□□□ -1.87
EFNB3Q15768 AC006116.10-201ENST00000591836 581 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.35□□□□□ -1.87
EFNB3Q15768 AL606834.2-201ENST00000602954 668 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AC004067.1-201ENST00000608733 700 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.35□□□□□ -1.87
EFNB3Q15768 AC005344.1-201ENST00000613391 459 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AC139792.3-201ENST00000623525 224 ntBASIC3.35□□□□□ -1.87
EFNB3Q15768 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.35□□□□□ -1.87
EFNB3Q15768 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.35□□□□□ -1.87
EFNB3Q15768 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB3Q15768 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB3Q15768 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.35□□□□□ -1.87
EFNB3Q15768 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB3Q15768 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
EFNB3Q15768 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
EFNB3Q15768 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.34□□□□□ -1.87
EFNB3Q15768 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
EFNB3Q15768 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
EFNB3Q15768 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.34□□□□□ -1.87
EFNB3Q15768 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
EFNB3Q15768 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.34□□□□□ -1.87
EFNB3Q15768 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
EFNB3Q15768 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
EFNB3Q15768 Y_RNA.159-201ENST00000363674 87 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 Y_RNA.450-201ENST00000384198 113 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 SNORA48.7-201ENST00000391302 135 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms