Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 RNA5SP269-201ENST00000459032 137 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDK3Q00526 AC105313.1-201ENST00000509121 353 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AL359273.1-201ENST00000510918 627 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.29□□□□□ -1.88
CDK3Q00526 GMPSP1-201ENST00000514075 579 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 SNORA70.14-201ENST00000516205 110 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 SNORA70.16-201ENST00000516390 95 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 RNU6-840P-201ENST00000517275 65 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.29□□□□□ -1.88
CDK3Q00526 AP001804.3-201ENST00000525146 880 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.29□□□□□ -1.88
CDK3Q00526 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.29□□□□□ -1.88
CDK3Q00526 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.29□□□□□ -1.88
CDK3Q00526 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.29□□□□□ -1.88
CDK3Q00526 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 AL157394.1-201ENST00000562983 1224 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AC055876.1-202ENST00000567053 138 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.29□□□□□ -1.88
CDK3Q00526 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 AP005136.1-201ENST00000579765 429 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.29□□□□□ -1.88
CDK3Q00526 CKS1BP3-201ENST00000600888 237 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK3Q00526 AL358072.1-201ENST00000604156 575 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AL162713.1-201ENST00000604480 262 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.29□□□□□ -1.88
CDK3Q00526 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.29□□□□□ -1.88
CDK3Q00526 AC090970.3-201ENST00000612566 866 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AC025594.3-201ENST00000613068 790 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AL110115.1-201ENST00000614396 364 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 MIR7112-201ENST00000616126 65 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AL356321.1-201ENST00000621360 228 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AC110801.1-201ENST00000623590 212 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CDK3Q00526 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
CDK3Q00526 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CDK3Q00526 AC017071.1-201ENST00000564407 2204 ntBASIC3.29□□□□□ -1.88
CDK3Q00526 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CDK3Q00526 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CDK3Q00526 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDK3Q00526 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDK3Q00526 RNU1-39P-201ENST00000383897 165 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 RNU6-278P-201ENST00000390945 109 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 RPS7P13-201ENST00000413955 498 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK3Q00526 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.28□□□□□ -1.88
CDK3Q00526 RPL23AP82-202ENST00000427528 469 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 AC008850.1-201ENST00000427546 362 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.28□□□□□ -1.88
CDK3Q00526 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDK3Q00526 MTND4P32-201ENST00000437189 1237 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 KATNBL1P3-201ENST00000443475 909 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 RPL17P49-201ENST00000443728 411 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 TAF9P1-201ENST00000445421 515 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 ELOCP30-201ENST00000447108 299 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 TAF9P2-201ENST00000454958 515 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 CEACAMP4-201ENST00000457676 421 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 CENPBD1P1-201ENST00000464061 469 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 RPS23P3-201ENST00000470993 430 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.28□□□□□ -1.88
CDK3Q00526 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDK3Q00526 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDK3Q00526 AC114967.1-201ENST00000504890 259 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 AC110794.1-201ENST00000505816 425 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 RNU1-61P-201ENST00000516107 151 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.28□□□□□ -1.88
CDK3Q00526 FAM60DP-201ENST00000524174 632 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 DEFB108A-201ENST00000530110 222 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK3Q00526 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK3Q00526 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK3Q00526 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK3Q00526 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK3Q00526 AC015917.1-201ENST00000579654 510 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 ZNF415P1-201ENST00000582279 1166 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 AF038458.1-201ENST00000588406 262 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.28□□□□□ -1.88
CDK3Q00526 BNIP3P8-201ENST00000597863 560 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK3Q00526 AC073544.2-201ENST00000601155 540 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 AL606834.2-201ENST00000602954 668 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.28□□□□□ -1.88
CDK3Q00526 AC073657.2-201ENST00000605661 303 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDK3Q00526 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK3Q00526 AC092140.2-201ENST00000618027 521 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.28□□□□□ -1.88
CDK3Q00526 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.28□□□□□ -1.88
CDK3Q00526 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms