Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC011890.2-201ENST00000613393 294 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 AC025034.2-201ENST00000623264 286 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1P60507 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.82□□□□□ -1.64
ERVFC1P60507 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ERVFC1P60507 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1P60507 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1P60507 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ERVFC1P60507 MTND5P28-201ENST00000438005 1594 ntBASIC4.82□□□□□ -1.64
ERVFC1P60507 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1P60507 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1P60507 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
ERVFC1P60507 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ERVFC1P60507 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
ERVFC1P60507 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
ERVFC1P60507 AC103710.2-202ENST00000641454 2853 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ERVFC1P60507 RNU1-94P-201ENST00000362627 173 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 RNU6-99P-201ENST00000364721 107 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 Y_RNA.307-201ENST00000365022 117 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 RNU1-115P-201ENST00000365329 160 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 RNU6-61P-201ENST00000365528 109 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 Y_RNA.496-201ENST00000384444 101 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 AP000580.1-201ENST00000404439 358 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 RNU2-64P-201ENST00000411315 191 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.81□□□□□ -1.64
ERVFC1P60507 RPL7P46-201ENST00000425129 740 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 ISCUP1-201ENST00000454451 448 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 AC053481.1-201ENST00000467217 306 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 AL136126.1-201ENST00000473603 402 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 AC092451.1-201ENST00000480211 153 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.81□□□□□ -1.64
ERVFC1P60507 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 Y_RNA.721-201ENST00000517207 102 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 AC087854.1-201ENST00000519706 414 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.81□□□□□ -1.64
ERVFC1P60507 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.81□□□□□ -1.64
ERVFC1P60507 AC024224.1-201ENST00000538284 609 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.81□□□□□ -1.64
ERVFC1P60507 AC006349.1-201ENST00000555526 235 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.81□□□□□ -1.64
ERVFC1P60507 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.81□□□□□ -1.64
ERVFC1P60507 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.81□□□□□ -1.64
ERVFC1P60507 AC018889.1-201ENST00000605372 397 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 MIR92B-201ENST00000607575 96 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 AL355365.1-201ENST00000616480 294 ntBASIC4.81□□□□□ -1.64
ERVFC1P60507 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.81□□□□□ -1.64
ERVFC1P60507 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.81□□□□□ -1.64
ERVFC1P60507 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ERVFC1P60507 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.81□□□□□ -1.64
ERVFC1P60507 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ERVFC1P60507 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ERVFC1P60507 MTND5P27-201ENST00000428871 1720 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ERVFC1P60507 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ERVFC1P60507 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ERVFC1P60507 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.8□□□□□ -1.64
ERVFC1P60507 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
ERVFC1P60507 AL158163.1-201ENST00000603915 1649 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ERVFC1P60507 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ERVFC1P60507 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ERVFC1P60507 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ERVFC1P60507 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ERVFC1P60507 RNU6-490P-201ENST00000362985 107 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 RNU5E-6P-201ENST00000365574 115 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 RNU6-1226P-201ENST00000384317 107 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 AL136372.1-201ENST00000403060 228 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ERVFC1P60507 AC008267.5-201ENST00000424928 265 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 AC004938.1-201ENST00000438468 308 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 CYCSP24-201ENST00000445119 316 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.8□□□□□ -1.64
ERVFC1P60507 RPS24P6-201ENST00000452670 400 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 GSTA11P-201ENST00000452866 669 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 RPL22P13-201ENST00000493291 347 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 AC116337.1-201ENST00000509680 687 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.8□□□□□ -1.64
ERVFC1P60507 TRAV8-5-201ENST00000537369 341 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.8□□□□□ -1.64
ERVFC1P60507 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ERVFC1P60507 AL354984.3-201ENST00000604803 325 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.8□□□□□ -1.64
ERVFC1P60507 SNX18P1Y-201ENST00000616231 511 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 AC092608.2-201ENST00000624427 218 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.8□□□□□ -1.64
ERVFC1P60507 MIR492-201ENST00000638676 116 ntBASIC4.8□□□□□ -1.64
ERVFC1P60507 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
ERVFC1P60507 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ERVFC1P60507 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ERVFC1P60507 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ERVFC1P60507 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
ERVFC1P60507 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ERVFC1P60507 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
ERVFC1P60507 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERVFC1P60507 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ERVFC1P60507 TPTE2P4-201ENST00000258589 1605 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERVFC1P60507 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 1193 ms