Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC008885.1-201ENST00000514930 301 ntBASIC3.3□□□□□ -1.88
LHX1P48742 RNA5SP217-201ENST00000515959 91 ntBASIC3.3□□□□□ -1.88
LHX1P48742 RNU6-798P-201ENST00000516912 103 ntBASIC3.3□□□□□ -1.88
LHX1P48742 SCARNA20.6-201ENST00000517251 106 ntBASIC3.3□□□□□ -1.88
LHX1P48742 AC106038.2-201ENST00000520706 568 ntBASIC3.3□□□□□ -1.88
LHX1P48742 AC104027.1-201ENST00000521887 300 ntBASIC3.3□□□□□ -1.88
LHX1P48742 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.3□□□□□ -1.88
LHX1P48742 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.3□□□□□ -1.88
LHX1P48742 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.3□□□□□ -1.88
LHX1P48742 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.3□□□□□ -1.88
LHX1P48742 AL391156.1-201ENST00000554965 554 ntBASIC3.3□□□□□ -1.88
LHX1P48742 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.3□□□□□ -1.88
LHX1P48742 MIR3915-201ENST00000578518 97 ntBASIC3.3□□□□□ -1.88
LHX1P48742 TPMTP1-201ENST00000592307 737 ntBASIC3.3□□□□□ -1.88
LHX1P48742 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.3□□□□□ -1.88
LHX1P48742 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.3□□□□□ -1.88
LHX1P48742 AP000403.1-201ENST00000603349 851 ntBASIC3.3□□□□□ -1.88
LHX1P48742 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.3□□□□□ -1.88
LHX1P48742 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.3□□□□□ -1.88
LHX1P48742 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LHX1P48742 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LHX1P48742 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.3□□□□□ -1.88
LHX1P48742 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LHX1P48742 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
LHX1P48742 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.3□□□□□ -1.88
LHX1P48742 PABPC1P9-201ENST00000426076 1612 ntBASIC3.3□□□□□ -1.88
LHX1P48742 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LHX1P48742 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LHX1P48742 MTND5P33-201ENST00000571250 1450 ntBASIC3.29□□□□□ -1.88
LHX1P48742 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.29□□□□□ -1.88
LHX1P48742 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LHX1P48742 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LHX1P48742 RPL7P26-201ENST00000333817 754 ntBASIC3.29□□□□□ -1.88
LHX1P48742 RNY4P24-201ENST00000362735 96 ntBASIC3.29□□□□□ -1.88
LHX1P48742 SNORA71.1-201ENST00000364523 117 ntBASIC3.29□□□□□ -1.88
LHX1P48742 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LHX1P48742 AC110754.1-201ENST00000399740 601 ntBASIC3.29□□□□□ -1.88
LHX1P48742 AC007390.1-201ENST00000415722 356 ntBASIC3.29□□□□□ -1.88
LHX1P48742 YPEL5P1-201ENST00000419731 367 ntBASIC3.29□□□□□ -1.88
LHX1P48742 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.29□□□□□ -1.88
LHX1P48742 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.29□□□□□ -1.88
LHX1P48742 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LHX1P48742 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.29□□□□□ -1.88
LHX1P48742 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.29□□□□□ -1.88
LHX1P48742 AC109583.1-201ENST00000432156 268 ntBASIC3.29□□□□□ -1.88
LHX1P48742 RPL36AP33-201ENST00000450395 310 ntBASIC3.29□□□□□ -1.88
LHX1P48742 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.29□□□□□ -1.88
LHX1P48742 MTCO1P42-201ENST00000457379 726 ntBASIC3.29□□□□□ -1.88
LHX1P48742 SETP11-201ENST00000473027 690 ntBASIC3.29□□□□□ -1.88
LHX1P48742 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.29□□□□□ -1.88
LHX1P48742 HMGN1P28-201ENST00000521340 364 ntBASIC3.29□□□□□ -1.88
LHX1P48742 AC093331.1-201ENST00000521474 169 ntBASIC3.29□□□□□ -1.88
LHX1P48742 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.29□□□□□ -1.88
LHX1P48742 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.29□□□□□ -1.88
LHX1P48742 AC091489.2-201ENST00000566263 604 ntBASIC3.29□□□□□ -1.88
LHX1P48742 AC109446.2-201ENST00000567872 497 ntBASIC3.29□□□□□ -1.88
LHX1P48742 AP001029.3-201ENST00000588063 596 ntBASIC3.29□□□□□ -1.88
LHX1P48742 AC011468.4-201ENST00000603942 409 ntBASIC3.29□□□□□ -1.88
LHX1P48742 AC106900.2-201ENST00000604994 317 ntBASIC3.29□□□□□ -1.88
LHX1P48742 AC004067.1-201ENST00000608733 700 ntBASIC3.29□□□□□ -1.88
LHX1P48742 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LHX1P48742 AC092326.2-201ENST00000624772 1561 ntBASIC3.29□□□□□ -1.88
LHX1P48742 ZNF833P-201ENST00000424938 1494 ntBASIC3.28□□□□□ -1.88
LHX1P48742 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LHX1P48742 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.28□□□□□ -1.88
LHX1P48742 AF117829.1-206ENST00000621883 3802 ntBASIC3.28□□□□□ -1.88
LHX1P48742 AP001148.1-201ENST00000624124 2359 ntBASIC3.28□□□□□ -1.88
LHX1P48742 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LHX1P48742 RNU5F-6P-201ENST00000362979 116 ntBASIC3.28□□□□□ -1.88
LHX1P48742 RNU5E-8P-201ENST00000363502 116 ntBASIC3.28□□□□□ -1.88
LHX1P48742 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LHX1P48742 RNU6-76P-201ENST00000384060 104 ntBASIC3.28□□□□□ -1.88
LHX1P48742 MIR128-1-201ENST00000384921 82 ntBASIC3.28□□□□□ -1.88
LHX1P48742 RNU4-65P-201ENST00000410473 140 ntBASIC3.28□□□□□ -1.88
LHX1P48742 RPL7P8-201ENST00000411964 730 ntBASIC3.28□□□□□ -1.88
LHX1P48742 AC245291.1-201ENST00000419501 328 ntBASIC3.28□□□□□ -1.88
LHX1P48742 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.28□□□□□ -1.88
LHX1P48742 AC233728.2-201ENST00000425348 757 ntBASIC3.28□□□□□ -1.88
LHX1P48742 RPL26P6-201ENST00000440913 438 ntBASIC3.28□□□□□ -1.88
LHX1P48742 GDI2P2-201ENST00000445131 608 ntBASIC3.28□□□□□ -1.88
LHX1P48742 AL592447.1-201ENST00000447592 540 ntBASIC3.28□□□□□ -1.88
LHX1P48742 KATNBL1P6-201ENST00000453433 915 ntBASIC3.28□□□□□ -1.88
LHX1P48742 AC010468.1-201ENST00000461022 817 ntBASIC3.28□□□□□ -1.88
LHX1P48742 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.28□□□□□ -1.88
LHX1P48742 RNU1-61P-201ENST00000516107 151 ntBASIC3.28□□□□□ -1.88
LHX1P48742 SNORA64.4-201ENST00000516632 81 ntBASIC3.28□□□□□ -1.88
LHX1P48742 AC087373.1-201ENST00000524920 491 ntBASIC3.28□□□□□ -1.88
LHX1P48742 AL133271.1-201ENST00000538229 291 ntBASIC3.28□□□□□ -1.88
LHX1P48742 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.28□□□□□ -1.88
LHX1P48742 H3F3AP1-201ENST00000559984 334 ntBASIC3.28□□□□□ -1.88
LHX1P48742 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.28□□□□□ -1.88
LHX1P48742 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.28□□□□□ -1.88
LHX1P48742 AL845331.3-202ENST00000562856 261 ntBASIC3.28□□□□□ -1.88
LHX1P48742 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.28□□□□□ -1.88
LHX1P48742 AC008507.1-201ENST00000587506 734 ntBASIC3.28□□□□□ -1.88
LHX1P48742 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.28□□□□□ -1.88
LHX1P48742 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LHX1P48742 AC092354.1-201ENST00000606057 376 ntBASIC3.28□□□□□ -1.88
LHX1P48742 AP002826.1-201ENST00000608835 315 ntBASIC3.28□□□□□ -1.88
LHX1P48742 XIST_intron.1-201ENST00000619444 68 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms