Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL158063.1-201ENST00000615349 536 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 AL392088.2-201ENST00000637607 285 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 OR5H6-203ENST00000642105 978 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HNF4AP41235 DDX43P2-201ENST00000604753 1354 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HNF4AP41235 AC093908.1-201ENST00000623125 8092 ntBASIC3.32□□□□□ -1.88
HNF4AP41235 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.32□□□□□ -1.88
HNF4AP41235 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.31□□□□□ -1.88
HNF4AP41235 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HNF4AP41235 AP003122.5-201ENST00000527668 3766 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HNF4AP41235 AL672167.1-206ENST00000356293 943 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 MIR30E-201ENST00000362104 92 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 RNU4-35P-201ENST00000362588 141 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 RNU6-1078P-201ENST00000364522 103 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 RNA5SP88-201ENST00000365560 109 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 RNU6-805P-201ENST00000365643 106 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 SNORD116-4-201ENST00000384733 96 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 MIR670-201ENST00000390142 98 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.31□□□□□ -1.88
HNF4AP41235 AC018630.2-202ENST00000422992 927 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 AL953862.1-201ENST00000423016 168 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.31□□□□□ -1.88
HNF4AP41235 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.31□□□□□ -1.88
HNF4AP41235 DLGAP5P1-201ENST00000430307 464 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 OR4K11P-201ENST00000431829 904 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 SNRPEP7-201ENST00000438350 220 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 MTND5P14-201ENST00000441481 1267 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.31□□□□□ -1.88
HNF4AP41235 MTND2P24-201ENST00000453434 806 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 RBMY2UP-201ENST00000453474 324 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 MTND1P9-201ENST00000453775 944 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 MTCO2P18-201ENST00000457151 658 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 AC109486.1-201ENST00000486833 374 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 AC092185.1-201ENST00000491371 97 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HNF4AP41235 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.31□□□□□ -1.88
HNF4AP41235 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.31□□□□□ -1.88
HNF4AP41235 AC124947.2-202ENST00000552735 133 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 AC024909.2-201ENST00000553035 286 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.31□□□□□ -1.88
HNF4AP41235 AC037471.2-201ENST00000564941 598 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 AC012557.2-201ENST00000605919 418 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 RN7SKP299-201ENST00000606679 301 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 U3.45-201ENST00000607547 219 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.31□□□□□ -1.88
HNF4AP41235 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.31□□□□□ -1.88
HNF4AP41235 AL356266.1-201ENST00000623311 483 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 AL356596.1-201ENST00000624230 379 ntBASIC3.31□□□□□ -1.88
HNF4AP41235 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HNF4AP41235 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.31□□□□□ -1.88
HNF4AP41235 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HNF4AP41235 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HNF4AP41235 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HNF4AP41235 RNU4-21P-201ENST00000362802 126 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 U3.4-201ENST00000363352 213 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 SNORA48.7-201ENST00000391302 135 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.3□□□□□ -1.88
HNF4AP41235 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HNF4AP41235 AC126124.2-201ENST00000413542 321 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 Z99497.1-201ENST00000421282 135 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 ATP5JP1-201ENST00000431631 322 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 AL353705.1-201ENST00000433468 480 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 USP9YP10-201ENST00000454868 628 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.3□□□□□ -1.88
HNF4AP41235 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.3□□□□□ -1.88
HNF4AP41235 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.3□□□□□ -1.88
HNF4AP41235 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.3□□□□□ -1.88
HNF4AP41235 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.3□□□□□ -1.88
HNF4AP41235 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HNF4AP41235 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.3□□□□□ -1.88
HNF4AP41235 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.3□□□□□ -1.88
HNF4AP41235 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.3□□□□□ -1.88
HNF4AP41235 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.3□□□□□ -1.88
HNF4AP41235 AMZ2P1-203ENST00000565833 850 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 AC012414.6-201ENST00000568241 401 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 HMGB1P6-201ENST00000569046 646 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.3□□□□□ -1.88
HNF4AP41235 MIR4429-201ENST00000580105 73 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 AC073544.2-201ENST00000601155 540 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 DUXAP4-201ENST00000603046 613 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 AC013553.2-201ENST00000604244 589 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 AC064872.1-201ENST00000604823 1072 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 AL031775.1-201ENST00000607014 887 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
HNF4AP41235 AC127502.3-201ENST00000636170 1206 ntBASIC3.3□□□□□ -1.88
HNF4AP41235 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.3□□□□□ -1.88
HNF4AP41235 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.3□□□□□ -1.88
HNF4AP41235 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
HNF4AP41235 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.29□□□□□ -1.88
HNF4AP41235 AC099654.7-201ENST00000635788 2127 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HNF4AP41235 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HNF4AP41235 RNU6-198P-201ENST00000384258 104 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 SNORA36C-201ENST00000384289 132 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 RNU6-1207P-201ENST00000384343 107 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 SNORD17-201ENST00000390930 237 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 MIR1289-1-201ENST00000408836 144 ntBASIC3.29□□□□□ -1.88
HNF4AP41235 RNA5SP293-201ENST00000410527 113 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms