Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
LTBRP36941 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBRP36941 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LTBRP36941 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LTBRP36941 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBRP36941 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LTBRP36941 RNU4-44P-201ENST00000363050 141 ntBASIC4.56□□□□□ -1.68
LTBRP36941 RNU6-254P-201ENST00000363377 107 ntBASIC4.56□□□□□ -1.68
LTBRP36941 SNORA73.2-201ENST00000364946 201 ntBASIC4.56□□□□□ -1.68
LTBRP36941 RNU6-190P-201ENST00000384154 102 ntBASIC4.56□□□□□ -1.68
LTBRP36941 RNU6-474P-201ENST00000384243 107 ntBASIC4.56□□□□□ -1.68
LTBRP36941 MIR559-201ENST00000385188 96 ntBASIC4.56□□□□□ -1.68
LTBRP36941 AL583834.1-201ENST00000406943 343 ntBASIC4.56□□□□□ -1.68
LTBRP36941 RN7SKP158-201ENST00000410453 326 ntBASIC4.56□□□□□ -1.68
LTBRP36941 BX682237.1-201ENST00000415016 335 ntBASIC4.56□□□□□ -1.68
LTBRP36941 AL139396.1-201ENST00000421137 167 ntBASIC4.56□□□□□ -1.68
LTBRP36941 HMGN2P27-201ENST00000427352 270 ntBASIC4.56□□□□□ -1.68
LTBRP36941 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LTBRP36941 AC104058.1-201ENST00000448028 297 ntBASIC4.56□□□□□ -1.68
LTBRP36941 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.56□□□□□ -1.68
LTBRP36941 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.56□□□□□ -1.68
LTBRP36941 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.56□□□□□ -1.68
LTBRP36941 Y_RNA.639-201ENST00000458981 102 ntBASIC4.56□□□□□ -1.68
LTBRP36941 HMGB3P15-201ENST00000507326 574 ntBASIC4.56□□□□□ -1.68
LTBRP36941 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.56□□□□□ -1.68
LTBRP36941 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBRP36941 RNA5SP454-201ENST00000517231 127 ntBASIC4.56□□□□□ -1.68
LTBRP36941 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.56□□□□□ -1.68
LTBRP36941 AC135001.1-201ENST00000544546 283 ntBASIC4.56□□□□□ -1.68
LTBRP36941 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.56□□□□□ -1.68
LTBRP36941 OR4H12P-201ENST00000556269 907 ntBASIC4.56□□□□□ -1.68
LTBRP36941 HSPE1P5-201ENST00000561489 272 ntBASIC4.56□□□□□ -1.68
LTBRP36941 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.56□□□□□ -1.68
LTBRP36941 AL670379.10-201ENST00000604330 253 ntBASIC4.56□□□□□ -1.68
LTBRP36941 AC010680.4-201ENST00000605334 543 ntBASIC4.56□□□□□ -1.68
LTBRP36941 AL670379.9-201ENST00000605428 253 ntBASIC4.56□□□□□ -1.68
LTBRP36941 AC007619.2-201ENST00000605743 379 ntBASIC4.56□□□□□ -1.68
LTBRP36941 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.56□□□□□ -1.68
LTBRP36941 AC009570.1-201ENST00000609599 745 ntBASIC4.56□□□□□ -1.68
LTBRP36941 FAM27D1-201ENST00000612308 341 ntBASIC4.56□□□□□ -1.68
LTBRP36941 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LTBRP36941 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
LTBRP36941 AL592437.2-201ENST00000421655 2434 ntBASIC4.56□□□□□ -1.68
LTBRP36941 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
LTBRP36941 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LTBRP36941 AL049555.1-201ENST00000562834 1933 ntBASIC4.56□□□□□ -1.68
LTBRP36941 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBRP36941 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBRP36941 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
LTBRP36941 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LTBRP36941 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LTBRP36941 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LTBRP36941 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
LTBRP36941 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LTBRP36941 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LTBRP36941 RNA5SP124-201ENST00000362739 110 ntBASIC4.55□□□□□ -1.68
LTBRP36941 RN7SKP44-201ENST00000363602 316 ntBASIC4.55□□□□□ -1.68
LTBRP36941 SNORD70.1-201ENST00000391007 85 ntBASIC4.55□□□□□ -1.68
LTBRP36941 SNORA75.4-201ENST00000391278 119 ntBASIC4.55□□□□□ -1.68
LTBRP36941 MTCYBP4-201ENST00000401524 249 ntBASIC4.55□□□□□ -1.68
LTBRP36941 RNA5SP36-201ENST00000410197 133 ntBASIC4.55□□□□□ -1.68
LTBRP36941 RNU6-370P-201ENST00000411008 104 ntBASIC4.55□□□□□ -1.68
LTBRP36941 RPL7AP73-201ENST00000413490 353 ntBASIC4.55□□□□□ -1.68
LTBRP36941 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.55□□□□□ -1.68
LTBRP36941 PDSS1P1-201ENST00000422953 1114 ntBASIC4.55□□□□□ -1.68
LTBRP36941 EIF4HP2-201ENST00000424380 563 ntBASIC4.55□□□□□ -1.68
LTBRP36941 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.55□□□□□ -1.68
LTBRP36941 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.55□□□□□ -1.68
LTBRP36941 AC020890.1-201ENST00000491837 504 ntBASIC4.55□□□□□ -1.68
LTBRP36941 MTND5P5-201ENST00000503764 376 ntBASIC4.55□□□□□ -1.68
LTBRP36941 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.55□□□□□ -1.68
LTBRP36941 RN7SKP24-201ENST00000515888 284 ntBASIC4.55□□□□□ -1.68
LTBRP36941 RNU6-840P-201ENST00000517275 65 ntBASIC4.55□□□□□ -1.68
LTBRP36941 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.55□□□□□ -1.68
LTBRP36941 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.55□□□□□ -1.68
LTBRP36941 COPS8P3-201ENST00000526024 482 ntBASIC4.55□□□□□ -1.68
LTBRP36941 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.55□□□□□ -1.68
LTBRP36941 APOOP3-201ENST00000536787 586 ntBASIC4.55□□□□□ -1.68
LTBRP36941 RN7SL435P-201ENST00000584418 282 ntBASIC4.55□□□□□ -1.68
LTBRP36941 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LTBRP36941 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.55□□□□□ -1.68
LTBRP36941 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
LTBRP36941 LINC01109-201ENST00000603837 3081 ntBASIC4.55□□□□□ -1.68
LTBRP36941 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LTBRP36941 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LTBRP36941 AC010300.1-201ENST00000600671 5134 ntBASIC4.55□□□□□ -1.68
LTBRP36941 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LTBRP36941 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LTBRP36941 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
LTBRP36941 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.54□□□□□ -1.68
LTBRP36941 GVINP1-202ENST00000531871 7271 ntBASIC4.54□□□□□ -1.68
LTBRP36941 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LTBRP36941 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
LTBRP36941 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LTBRP36941 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
LTBRP36941 RNA5SP119-201ENST00000362715 117 ntBASIC4.54□□□□□ -1.68
LTBRP36941 RNA5SP187-201ENST00000384400 119 ntBASIC4.54□□□□□ -1.68
LTBRP36941 SNORD3H-201ENST00000384486 214 ntBASIC4.54□□□□□ -1.68
LTBRP36941 CISD1P1-201ENST00000393907 327 ntBASIC4.54□□□□□ -1.68
LTBRP36941 RPL5P18-201ENST00000406671 891 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms