Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 HMGN2P35-201ENST00000412164 270 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXA9P31269 AL513175.2-201ENST00000422071 443 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 TMEM167AP1-201ENST00000423409 219 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 AL035410.1-201ENST00000427409 427 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 USP9YP22-201ENST00000438971 294 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.69□□□□□ -1.98
HOXA9P31269 ZNF886P-201ENST00000450781 723 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 PABPC1P3-201ENST00000469174 459 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 RPL23AP11-201ENST00000475260 469 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 AC013828.1-201ENST00000481845 158 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 RN7SL297P-201ENST00000483161 293 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 OR5H5P-201ENST00000503164 928 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 MLLT10P2-201ENST00000506434 249 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXA9P31269 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXA9P31269 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXA9P31269 ZNF705CP-201ENST00000530515 889 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.69□□□□□ -1.98
HOXA9P31269 LSM6P2-201ENST00000552208 177 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 AL132857.1-201ENST00000555180 708 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 LARP7P2-201ENST00000575306 125 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXA9P31269 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXA9P31269 AC090116.1-201ENST00000615679 446 ntBASIC2.69□□□□□ -1.98
HOXA9P31269 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXA9P31269 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
HOXA9P31269 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
HOXA9P31269 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
HOXA9P31269 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXA9P31269 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HOXA9P31269 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXA9P31269 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.68□□□□□ -1.98
HOXA9P31269 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HOXA9P31269 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXA9P31269 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
HOXA9P31269 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HOXA9P31269 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HOXA9P31269 AL133384.1-201ENST00000412744 351 ntBASIC2.68□□□□□ -1.98
HOXA9P31269 FNDC3CP-201ENST00000420795 1155 ntBASIC2.68□□□□□ -1.98
HOXA9P31269 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXA9P31269 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.68□□□□□ -1.98
HOXA9P31269 EEF1A1P39-201ENST00000440791 250 ntBASIC2.68□□□□□ -1.98
HOXA9P31269 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.68□□□□□ -1.98
HOXA9P31269 RPL23AP76-201ENST00000441860 458 ntBASIC2.68□□□□□ -1.98
HOXA9P31269 AL606517.1-201ENST00000446914 387 ntBASIC2.68□□□□□ -1.98
HOXA9P31269 TRBV26-201ENST00000456572 344 ntBASIC2.68□□□□□ -1.98
HOXA9P31269 PNPLA4P1-201ENST00000458328 305 ntBASIC2.68□□□□□ -1.98
HOXA9P31269 AC005410.1-202ENST00000460347 485 ntBASIC2.68□□□□□ -1.98
HOXA9P31269 RAC1P5-201ENST00000512182 576 ntBASIC2.68□□□□□ -1.98
HOXA9P31269 RNU6-1225P-201ENST00000516336 65 ntBASIC2.68□□□□□ -1.98
HOXA9P31269 MTND2P32-201ENST00000521584 1038 ntBASIC2.68□□□□□ -1.98
HOXA9P31269 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
HOXA9P31269 AL355836.1-201ENST00000555951 870 ntBASIC2.68□□□□□ -1.98
HOXA9P31269 AC010620.2-201ENST00000600135 313 ntBASIC2.68□□□□□ -1.98
HOXA9P31269 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.68□□□□□ -1.98
HOXA9P31269 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.68□□□□□ -1.98
HOXA9P31269 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HOXA9P31269 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
HOXA9P31269 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXA9P31269 RNU6-989P-201ENST00000362756 107 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 RNU5D-1-201ENST00000363299 116 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 RNU4-68P-201ENST00000364314 141 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 AC016769.3-201ENST00000396562 315 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 MTND4P13-201ENST00000402078 1023 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 RNU2-28P-201ENST00000410457 189 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 AC068533.2-201ENST00000411872 306 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXA9P31269 NPM1P11-201ENST00000417106 855 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXA9P31269 MRPS36P1-201ENST00000421291 307 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HOXA9P31269 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.67□□□□□ -1.98
HOXA9P31269 USP9YP24-201ENST00000434374 697 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 USP9YP17-201ENST00000444617 696 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 MTCO1P48-201ENST00000448024 1096 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HOXA9P31269 AC108734.3-201ENST00000481241 1165 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 AC103975.1-201ENST00000482506 483 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXA9P31269 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXA9P31269 RPPH1-2P-201ENST00000516688 293 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 AP001189.2-201ENST00000527320 189 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 MTCO3P13-201ENST00000577757 781 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXA9P31269 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXA9P31269 U73023.1-201ENST00000603134 700 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 AC005332.6-201ENST00000613178 446 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 AC140725.3-201ENST00000616193 880 ntBASIC2.67□□□□□ -1.98
HOXA9P31269 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HOXA9P31269 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HOXA9P31269 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXA9P31269 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXA9P31269 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXA9P31269 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HOXA9P31269 RNU6-413P-201ENST00000384115 107 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 RNU6-906P-201ENST00000384700 70 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 RNU4-53P-201ENST00000410828 140 ntBASIC2.66□□□□□ -1.98
HOXA9P31269 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms